Mixture models with a prior on the number of components
Jeffrey W Miller1, Matthew T Harrison2
1Department of Biostatistics, Harvard University.
Journal of the American Statistical Association
|July 10, 2018
Summary
Mixture of finite mixtures (MFM) models offer a Bayesian approach for unknown component numbers. Leveraging Dirichlet process mixture (DPM) model inference methods simplifies MFM implementation and improves performance, especially in high-dimensional data analysis.
Area of Science:
- Bayesian Statistics
- Machine Learning
- Computational Statistics
Background:
- Finite mixture models with an unknown number of components are often approached using a mixture of finite mixtures (MFM).
- Inference for MFMs typically relies on reversible jump Markov chain Monte Carlo (RJMCMC), which can be complex, particularly in high-dimensional settings.
- Dirichlet process mixture (DPM) models offer simpler inference methods adaptable to various applications.
Purpose of the Study:
- To demonstrate that Mixture of Finite Mixtures (MFM) models share key properties with Dirichlet Process Mixture (DPM) models.
- To show that DPM inference techniques can be directly applied to MFMs, simplifying implementation and enhancing performance.
- To illustrate the utility of this approach in analyzing complex, high-dimensional datasets.
Main Methods:
- Utilized the structural similarities between MFMs and DPMs, including their exchangeable partition distributions, restaurant processes, and stick-breaking representations.
- Adapted established inference algorithms from DPMs for use with MFMs.
- Applied the enhanced MFM inference framework to both simulated and real-world datasets.
Main Results:
- MFMs exhibit properties analogous to DPMs, enabling the direct application of DPM inference methods.
- This approach simplifies the implementation of MFMs and leads to substantial improvements in computational mixing.
- Demonstrated successful application to high-dimensional gene expression data for cancer subtype discrimination.
Conclusions:
- The shared properties between MFMs and DPMs provide a powerful and more accessible framework for Bayesian mixture modeling.
- Applying DPM inference techniques to MFMs significantly enhances their practical usability and computational efficiency.
- This integrated approach offers a robust solution for analyzing complex, high-dimensional data, as evidenced by cancer subtype analysis.
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