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Published on: September 19, 2018
A threshold model for receptor tyrosine kinase signaling specificity and cell fate determination
Allen Zinkle1, Moosa Mohammadi1
1Department of Biochemistry & Molecular Pharmacology, New York University School of Medicine, New York, NY, USA.
Abstract:
Upon ligand engagement, the single-pass transmembrane receptor tyrosine kinases (RTKs) dimerize to transmit qualitatively and quantitatively different intracellular signals that alter the transcriptional landscape and thereby determine the cellular response. The molecular mechanisms underlying these fundamental events are not well understood. Considering recent insights into the structural biology of fibroblast growth factor signaling, we propose a threshold model for RTK signaling specificity in which quantitative differences in the strength/longevity of ligand-induced receptor dimers on the cell surface lead to quantitative differences in the phosphorylation of activation loop (A-loop) tyrosines as well as qualitative differences in the phosphorylation of tyrosines mediating substrate recruitment. In this model, quantitative differences on A-loop tyrosine phosphorylation result in gradations in kinase activation, leading to the generation of intracellular signals of varying amplitude/duration. In contrast, qualitative differences in the pattern of tyrosine phosphorylation on the receptor result in the recruitment/activation of distinct substrates/intracellular pathways. Commensurate with both the dynamics of the intracellular signal and the types of intracellular pathways activated, unique transcriptional signatures are established. Our model provides a framework for engineering clinically useful ligands that can tune receptor dimerization stability so as to bias the cellular transcriptome to achieve a desired cellular output.
Insights
Receptor tyrosine kinases (RTKs) signal through dimerization. Differences in dimer strength and duration dictate distinct intracellular signals and transcriptional outcomes, enabling tailored cellular responses.
Area of Science:
- Molecular Biology
- Cell Signaling
- Structural Biology
Background:
- Receptor tyrosine kinases (RTKs) are crucial for cell signaling, but their precise mechanisms of specificity remain unclear.
- Ligand binding induces RTK dimerization, initiating downstream signaling cascades that influence cellular responses.
- Understanding RTK signaling is vital for deciphering cellular behavior and developing targeted therapies.
Purpose of the Study:
- To propose a threshold model for RTK signaling specificity based on dimerization dynamics.
- To elucidate how quantitative and qualitative differences in receptor dimerization affect intracellular signaling.
- To provide a framework for engineering ligands that modulate RTK signaling for therapeutic purposes.
Main Methods:
- The study integrates structural biology insights with a proposed signaling model.
- It focuses on analyzing fibroblast growth factor (FGF) signaling pathways.
- The model infers signaling outcomes based on receptor dimerization strength and duration.
Main Results:
- Quantitative differences in dimer strength/longevity lead to graded activation loop (A-loop) tyrosine phosphorylation, modulating kinase activity.
- Qualitative differences in receptor tyrosine phosphorylation patterns dictate the recruitment of specific downstream substrates.
- Varying signal amplitude, duration, and activated pathways result in distinct transcriptional signatures.
Conclusions:
- A threshold model explains RTK signaling specificity through receptor dimerization dynamics.
- Ligand-induced dimerization strength and longevity are key determinants of cellular response.
- This model offers a basis for designing ligands to control cellular transcription for therapeutic benefit.
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