A positive-charged patch and stabilized hydrophobic core are essential for avirulence function of AvrPib in the rice

Xin Zhang1, Dan He1,2, Yanxiang Zhao1

  • 1Ministry of Agriculture Key Laboratory of Pest Monitoring and Green Management, College of Plant Protection, China Agricultural University, Beijing, 100193, China.

Insights

Fungal avirulence effectors like AvrPib are crucial for pathogen infection. Structural analysis reveals key residues influencing function and host interaction, offering insights into fungal evasion mechanisms.

Area of Science:

  • Plant Pathology
  • Molecular Biology
  • Structural Biology

Background:

  • Fungal avirulence effectors are pathogen proteins that manipulate host immunity.
  • Understanding their structure-function relationships is vital for disease resistance research.
  • Many effectors lack characterized functions and evolutionary links.

Purpose of the Study:

  • To determine the crystal structure of AvrPib, an avirulence effector from Magnaporthe oryzae.
  • To investigate the role of specific residues in AvrPib's function, nuclear localization, and structural integrity.
  • To elucidate mechanisms of fungal effector evasion of host resistance.

Main Methods:

  • X-ray crystallography to determine AvrPib structure.
  • Site-directed mutagenesis to analyze key residues (positive-charged patch, hydrophobic core).
  • Assessment of avirulence function and nuclear localization of mutant AvrPib.

Main Results:

  • AvrPib structure is similar to other MAX effectors but possesses a unique positive-charge patch.
  • Five surface-exposed positive-charged residues are essential for avirulence and nuclear import.
  • Mutations in the hydrophobic core (V39A, V58A) destabilized the protein structure and abolished function.

Conclusions:

  • Surface charge distribution differences contribute to effector-receptor specificity variations.
  • Destabilization of the hydrophobic core is a mechanism for AvrPib to evade host recognition.
  • Structural insights into AvrPib provide a basis for understanding fungal pathogen evolution and host-pathogen interactions.

Related Concept Videos

The Nucleosome Core Particle02:10

The Nucleosome Core Particle

Nucleosomes are the DNA-histone complex, where the DNA strand is wound around the histone core. The histone core is an octamer containing two copies of H2A, H2B, H3, and H4 histone proteins.
The paradox
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their main responsibility is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. While on the other hand, they must allow polymerase enzymes to access DNA...
14.5K
Compounds Essential to Human Function01:25

Compounds Essential to Human Function

The human body is composed of cells that are fundamentally made up of several different molecules. These molecules are essential to carry out all physiological processes in the body and are broadly classified into organic and inorganic based on their chemical structures.
Inorganic Compounds Essential to Human Functioning
Inorganic compounds essential to human functioning include water, salts, acids, and bases. These compounds are inorganic, i.e., they do not have a carbon-hydrogen bond. Water...
10.3K
Ions and Ionic Charges03:27

Ions and Ionic Charges

In ordinary chemical reactions, the nucleus — which contains the protons and neutrons of each atom and thus identifies the element — remains unchanged. Electrons, however, can be added to atoms by transfer from other atoms, lost by transfer to other atoms, or shared with other atoms. The transfer and sharing of electrons among atoms govern the chemistry of the elements. During the formation of some compounds, atoms gain or lose electrons to form electrically charged particles called...
79.2K
Formal Charges02:42

Formal Charges

In some cases, there are seemingly more than one valid Lewis structures for molecules and polyatomic ions. The concept of formal charges can be used to help predict the most appropriate Lewis structure when more than one reasonable structure exists.
40.6K
RNA Stability01:53

RNA Stability

Intact DNA strands can be found in fossils, while scientists sometimes struggle to keep RNA intact under laboratory conditions. The structural variations between RNA and DNA underlie the differences in their stability and longevity. Because DNA is double-stranded, it is inherently more stable. The single-stranded structure of RNA is less stable but also more flexible and can form weak internal bonds. Additionally, most RNAs in the cell are relatively short, while DNA can be up to 250 million...
35.8K
Essential Minerals for Bone Health01:31

Essential Minerals for Bone Health

The minerals contained in all of the food we consume are essential for our organ systems. However, certain essential minerals, such as calcium, phosphorus, magnesium, manganese, and fluoride, largely affect bone health.
Calcium and Phosphorus
Calcium is a critical component of bones, especially in the form of calcium phosphate and calcium carbonate. Since the body cannot make calcium, it must be obtained from the diet. However, calcium cannot be absorbed from the small intestine without...
6.5K