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LncRNA SNHG16 reverses the effects of miR-15a/16 on LPS-induced inflammatory pathway
Wenying Wang1, Chunyan Lou1, Jie Gao1
1Department of Pediatrics, Huaihe Hospital of Henan University, No. 8, Baobei Road, Gulou District, Kaifeng, 475000, China.
Abstract:
Nowadays, neonatal sepsis has gradually become a global problem for its high incidence and increasing mortality. Previous studies have reported that miR-15a and miR-16 are two important modulators in neonatal sepsis. However, the upstream molecular mechanism of miR-15a/16 cluster is still mysterious. This study aims to explore a lncRNA can bind with miR-15a/16 in neonatal sepsis. Microarray analysis helped us found top ten lncRNAs which were downregulated in neonatal sepsis serum. Among these ten lncRNAs, SNHG16 was uncovered to significantly downregulated both miR-15a and miR-16. According to the result of subcellular fractionation assay, SNHG16 was mainly located in the cytoplasm of RAW264.7 cell, indicating the potential ceRNA role of SNHG16. Mechanism investigations revealed that SNHG16 could act as a ceRNA to upregulate TLR4 which is the target mRNA of miR-15a/16 cluster. At last, rescue assays demonstrated that SNHG16 reversed the effects of miR-15a/16 on LPS-induced inflammatory pathway. In summary, SNHG16 can act as a ceRNA to modulate miR-15a/16 cluster, thereby affecting LSP-induced inflammatory pathway which was downregulated by miR-15a/16 cluster.
Insights
SNHG16 acts as a ceRNA in neonatal sepsis, modulating the miR-15a/16 cluster to affect the LPS-induced inflammatory pathway. This finding clarifies the upstream mechanism of miR-15a/16 in sepsis.
Area of Science:
- Molecular Biology
- Immunology
- Neonatal Research
Background:
- Neonatal sepsis presents a significant global health challenge with high incidence and mortality.
- MicroRNAs miR-15a and miR-16 are known modulators in neonatal sepsis, but their upstream regulatory mechanisms remain unclear.
Purpose of the Study:
- To investigate the role of long non-coding RNAs (lncRNAs) interacting with the miR-15a/16 cluster in neonatal sepsis.
- To elucidate the upstream molecular mechanism involving lncRNAs in neonatal sepsis.
Main Methods:
- Microarray analysis to identify downregulated lncRNAs in neonatal sepsis serum.
- Subcellular fractionation to determine SNHG16 localization.
- Mechanism investigations and rescue assays to assess SNHG16's ceRNA activity and its effect on the inflammatory pathway.
Main Results:
- SNHG16 was significantly downregulated in neonatal sepsis serum and primarily located in the cytoplasm, suggesting a ceRNA role.
- SNHG16 functions as a competing endogenous RNA (ceRNA) to upregulate TLR4, a target of miR-15a/16.
- SNHG16 reversed the effects of miR-15a/16 on the LPS-induced inflammatory pathway.
Conclusions:
- SNHG16 acts as a ceRNA, modulating the miR-15a/16 cluster in neonatal sepsis.
- This modulation affects the LPS-induced inflammatory pathway, offering potential therapeutic targets.
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