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Retrospective harmonization of multi-site diffusion MRI data acquired with different acquisition parameters
Suheyla Cetin Karayumak1, Sylvain Bouix1, Lipeng Ning1
1Psychiatry Neuroimaging Laboratory, Brigham and Women's Hospital and Harvard Medical School, USA.
Harmonizing multi-site diffusion MRI data is crucial for joint analysis. This new method effectively removes scanner-specific effects while preserving age and gender differences, requiring 16-18 controls per site for reliable results.
Area of Science:
- Neuroimaging
- Biomedical Engineering
- Data Science
Background:
- Joint analysis of multi-site diffusion MRI (dMRI) data increases statistical power for neuroimaging studies.
- Scanner-specific nonlinear effects and acquisition parameter differences prevent naive pooling of dMRI datasets.
- Harmonization is essential to remove scanner-specific effects for integrated dMRI analysis.
Purpose of the Study:
- To propose and validate a dMRI harmonization method for removing scanner-specific effects.
- To account for minor differences in acquisition parameters like b-value, spatial resolution, and gradient directions.
- To determine the minimum number of well-matched subjects needed for effective harmonization.
Main Methods:
- Developed a dMRI harmonization algorithm to remove scanner-specific effects.
- Validated the method on dMRI data from the Philadelphia Neurodevelopmental Cohort (PNC) and Brigham and Women's Hospital (BWH).
- Assessed the preservation of age and gender-related maturation differences using effect sizes.
Main Results:
- The proposed method successfully removed scanner-specific effects while preserving key neurodevelopmental differences.
- Age and gender-related maturation differences were maintained irrespective of sample size after harmonization.
- At least 16-18 well-matched healthy controls per site are required to reliably capture scanner-related differences.
Conclusions:
- The developed dMRI harmonization method enables retrospective harmonization of multi-site data despite acquisition parameter variations.
- The method preserves inter-subject anatomical variability, crucial for accurate neuroimaging research.
- This approach facilitates more powerful and comparative studies of brain disorders using pooled dMRI data.
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