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Constructing Cyclic Peptides Using an On-Tether Sulfonium Center
Published on: September 28, 2022
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SurE is a trans-acting thioesterase cyclizing two distinct non-ribosomal peptides
Kenichi Matsuda1, Masakazu Kobayashi, Takefumi Kuranaga
1Faculty of Pharmaceutical Sciences, Hokkaido University, Sapporo, Hokkaido 060-0812, Japan. wakimoto@pharm.hokudai.ac.jp.
Organic & Biomolecular Chemistry
|January 15, 2019
Summary
SurE is a novel thioesterase enzyme that releases non-ribosomal peptides from assembly lines. This enzyme demonstrates broad substrate tolerance, cyclizing diverse molecules from different pathways.
Area of Science:
- Biochemistry
- Molecular Biology
- Enzymology
Background:
- Non-ribosomal peptides (NRPs) are synthesized by large multi-modular enzymes.
- Thioesterases (TEs) are crucial for releasing completed NRPs from assembly lines.
- Surugamide biosynthesis involves a unique offloading mechanism.
Purpose of the Study:
- To characterize the novel thioesterase SurE involved in surugamide biosynthesis.
- To investigate the substrate specificity and cyclization activity of SurE.
- To understand the role of SurE in the broader context of NRP assembly line offloading.
Main Methods:
- Biochemical assays to determine enzyme activity.
- Analysis of substrate specificity using various NRP precursors.
- Homology modeling and structural analysis to understand enzyme-substrate interactions.
Main Results:
- SurE functions as a stand-alone thioesterase, distinct from typical TE domains within NRP synthetases.
- SurE exhibits broad substrate tolerance, efficiently cyclizing structurally unrelated substrates.
- The enzyme's homology to penicillin-binding proteins (PBPs) suggests potential mechanistic links.
Conclusions:
- SurE is a versatile offloading enzyme with significant substrate flexibility.
- The discovery of SurE expands our understanding of NRP biosynthesis and enzyme evolution.
- SurE's unique properties offer potential for biotechnological applications in peptide synthesis.
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