Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

The Equilibrium Binding Constant and Binding Strength02:18

The Equilibrium Binding Constant and Binding Strength

15.0K
The equilibrium binding constant (Kb) quantifies the strength of a protein-ligand interaction. Kb can be calculated as follows when the reaction is at equilibrium:
15.0K
What are Lipids?01:38

What are Lipids?

220.0K
Overview
220.0K
Ligand Binding Sites02:40

Ligand Binding Sites

15.0K
Proteins are dynamic macromolecules that carry out a wide variety of essential processes; however, the activities of most proteins depend on their interactions with other molecules or ions, known as ligands.
Protein-ligand interactions are quite specific; even though numerous potential ligands surround a cellular protein at any given time, only a particular ligand can bind to that protein. Moreover, a ligand binds only to a dedicated area on the surface of the protein, known as the...
15.0K
Factors Affecting Protein-Drug Binding: Protein-Related Factors01:20

Factors Affecting Protein-Drug Binding: Protein-Related Factors

554
Drug binding to proteins is a key aspect of pharmacokinetics and can influence a drug's distribution, absorption, and elimination in the body. Several factors, including the drug's physiochemical properties, protein concentration, disease states, and the number of binding sites on the protein, influence this process.
The physicochemical properties of a drug play a significant role in its ability to bind to proteins. Lipophilic drugs, which dissolve in fats, oils, and lipids, can be...
554
Structure of Lipids03:38

Structure of Lipids

98.7K
Lipids include a diverse group of compounds that are largely nonpolar in nature. This is because they are hydrocarbons that include mostly nonpolar carbon-carbon or carbon-hydrogen bonds. Non-polar molecules are hydrophobic (“water fearing”), or insoluble in water. Lipids perform many different functions in a cell. Cells store energy for long-term use in the form of fats. Lipids also provide insulation from the environment for plants and animals. For example, they help keep aquatic...
98.7K
Ligand Binding and Linkage00:49

Ligand Binding and Linkage

5.6K
Allosteric proteins have more than one ligand binding site; the binding of a ligand to any of these sites influences the binding of ligands to the other sites. When a protein is allosteric, its binding sites are called coupled or linked.  In the case of enzymes, the site that binds to the substrate is known as the active site and the other site is known as the regulatory site. When a ligand binds to the regulatory site, this leads to conformational changes in the protein that can influence...
5.6K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

The Fragmented Nature of Biosensor Development: Challenges and Paths to Mitigation.

Biosensors·2026
Same author

Spatially Resolved ABA Signalling Reveals Dual Role in Tomato Yield.

Plant biotechnology journal·2026
Same author

Plant Kelch phosphatases are Ser/Thr phosphatases involved in cell cycle regulation.

Proceedings of the National Academy of Sciences of the United States of America·2026
Same author

Protein Engineering of a Genetically Encodable Biosensor for Wastewater Detection of Profen NSAIDs.

Biotechnology and bioengineering·2026
Same author

A helper NLR channels organellar calcium to trigger plant immunity.

Science (New York, N.Y.)·2026
Same author

Reversible and causal epigenetic information loss in liver aging and disease.

PNAS nexus·2026

Related Experiment Video

Updated: Jan 29, 2026

Pull-down of Calmodulin-binding Proteins
07:51

Pull-down of Calmodulin-binding Proteins

Published on: January 23, 2012

25.9K

Optimized small-molecule pull-downs define MLBP1 as an acyl-lipid-binding protein.

Yelena Sterlin1, Oded Pri-Tal1, Gil Zimran1

  • 1The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, the Hebrew University of Jerusalem, Rehovot, 7610001, Israel.

The Plant Journal : for Cell and Molecular Biology
|February 9, 2019
PubMed
Summary
This summary is machine-generated.

Researchers identified new plant hormone ligands using a novel affinity purification method. This technique successfully uncovered monolinolenin binding to the MLBP1 protein in Arabidopsis, advancing our understanding of plant signaling pathways.

Keywords:
PYR/PYL/RCARin plantaABA signalingBet v 1START domainabscisic acidpolyketide cyclase-like proteinsprotein-metabolite interactionstechnical advance

More Related Videos

An Optimized Single-Molecule Pull-Down Assay for Quantification of Protein Phosphorylation
07:45

An Optimized Single-Molecule Pull-Down Assay for Quantification of Protein Phosphorylation

Published on: June 6, 2022

3.3K
An Optimized Quantitative Pull-Down Analysis of RNA-Binding Proteins Using Short Biotinylated RNA
07:55

An Optimized Quantitative Pull-Down Analysis of RNA-Binding Proteins Using Short Biotinylated RNA

Published on: February 17, 2023

5.2K

Related Experiment Videos

Last Updated: Jan 29, 2026

Pull-down of Calmodulin-binding Proteins
07:51

Pull-down of Calmodulin-binding Proteins

Published on: January 23, 2012

25.9K
An Optimized Single-Molecule Pull-Down Assay for Quantification of Protein Phosphorylation
07:45

An Optimized Single-Molecule Pull-Down Assay for Quantification of Protein Phosphorylation

Published on: June 6, 2022

3.3K
An Optimized Quantitative Pull-Down Analysis of RNA-Binding Proteins Using Short Biotinylated RNA
07:55

An Optimized Quantitative Pull-Down Analysis of RNA-Binding Proteins Using Short Biotinylated RNA

Published on: February 17, 2023

5.2K

Area of Science:

  • Plant Biology
  • Biochemistry
  • Molecular Biology

Background:

  • Abscisic acid (ABA) receptors are START domain proteins crucial for plant signaling.
  • While ABA receptors are well-studied, many other START domain proteins lack identified ligands.
  • Understanding these protein-ligand interactions is key to deciphering plant physiology.

Purpose of the Study:

  • To develop and optimize a method for identifying ligands of START domain proteins.
  • To discover novel protein-metabolite interactions within the START domain superfamily.
  • To investigate the ligand-binding capabilities of uncharacterized START domain proteins in plants.

Main Methods:

  • Utilized affinity purification of biotinylated proteins in Nicotiana benthamiana.
  • Employed untargeted liquid chromatography-mass spectrometry (LC-MS) for ligand identification.
  • Validated interactions using recombinant proteins and native extracts from transgenic Arabidopsis.

Main Results:

  • Optimized method confirmed known ABA-PYL interactions, demonstrating high sensitivity.
  • Identified monolinolenin as a ligand for MLBP1 (At4G01883).
  • Confirmed monolinolenin-MLBP1 interaction in both heterologous expression systems and native Arabidopsis context.

Conclusions:

  • The developed affinity purification-LC-MS method is effective for discovering plant protein-ligand interactions.
  • Monolinolenin is a novel ligand for the START domain protein MLBP1.
  • This study expands the known repertoire of plant START domain protein functions and their associated metabolites.