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Updated: Jan 28, 2026

A Standardized Pipeline for Examining Human Cerebellar Grey Matter Morphometry using Structural Magnetic Resonance Imaging
Published on: February 4, 2022
Automatic image processing pipeline for tracking longitudinal vessel changes in magnetic resonance angiography.
Chih-Yang Hsu1, Yimei Li2, Yuanyuan Han2
1Department of Radiation Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee, USA (Work Origin).
This study quantifies cerebral vessel diameter changes using longitudinal magnetic resonance angiography (MRA). The automated method accurately measures vessel dimensions, aiding in disease modeling.
Area of Science:
- Neuroimaging
- Medical Engineering
- Quantitative Biology
Background:
- Longitudinal magnetic resonance angiography (MRA) enables objective quantification of cerebral vessel diameter changes.
- Automated analysis of MRA facilitates vessel change assessment and downstream modeling.
Purpose of the Study:
- To characterize longitudinal changes in intracranial vessel diameter using time-of-flight (TOF) MRA.
- To develop and validate an automated method for measuring cerebral vessel diameters from MRA data.
Main Methods:
- Retrospective analysis of 112 pediatric patients with craniopharyngioma undergoing annual TOF MRA (1.5T and 3T) from 2006-2011.
- Automated vessel segmentation and diameter measurement at 1-mm intervals.
- Quantile regression used for outlier detection, with interventional angiography as a reference standard.
Main Results:
- Successful segmentation of major Circle of Willis vessels, excluding posterior communicating arteries due to hypoplasia.
- Median computed vessel diameter was 1.25 mm, with registration distortion < 0.04 mm in 99% of segments.
- Outliers (<4.34%) were more frequent in smaller vessels and near bifurcations (P < 0.001).
Conclusions:
- The proposed method allows noninvasive, objective assessment of cerebral vessel diameter changes from routine longitudinal MRA.
- High-throughput analysis of vascular trees combined with clinical data enables rigorous modeling of vessel diameter alterations.
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