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Leveraging Big Data to Transform Drug Discovery.

Benjamin S Glicksberg1,2, Li Li2,3, Rong Chen2,3

  • 1Bakar Computational Health Sciences Institute, University of California, San Francisco, CA, USA.

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Summary
This summary is machine-generated.

Computational methods accelerate drug discovery by leveraging public disease and drug data. This chapter details resources, tools, and workflows for identifying new drug indications, including important considerations for researchers.

Keywords:
Big dataBioinformaticsClinical informaticsDrug discoveryDrug repositioningDrug repurposingElectronic medical recordsGene expression dataPharmacogenomicsSystems pharmacology

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Area of Science:

  • Computational biology
  • Pharmacology
  • Bioinformatics

Background:

  • Increasing availability of public disease and drug-related data.
  • Growing application of computational methodologies in drug discovery.
  • Need for structured resources and workflows for in silico drug discovery.

Purpose of the Study:

  • To outline resources and tools for computational drug discovery.
  • To detail in silico workflows for identifying novel drug indications.
  • To discuss caveats and considerations for rigorous computational experiments.

Main Methods:

  • Review and curation of existing computational resources and tools.
  • In-depth analysis of two case studies employing in silico workflows.
  • Identification of potential novel indications for existing drugs.

Main Results:

  • Detailed description of available computational resources and tools.
  • Exemplification of successful in silico workflows in drug repurposing.
  • Identification of key considerations and potential pitfalls in computational drug discovery.

Conclusions:

  • Computational approaches, supported by data resources and defined workflows, can effectively identify novel drug indications.
  • Understanding the nuances and limitations of these methods is crucial for successful and rigorous in silico drug discovery.
  • This work provides a guide for researchers to conduct their own computational drug discovery experiments.