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Efficient and Site-specific Antibody Labeling by Strain-promoted Azide-alkyne Cycloaddition
Published on: December 23, 2016
Factors Controlling the Reactivity of Strained-Alkyne Embedded Cycloparaphenylenes
Yago García-Rodeja1, Israel Fernández1
1Departamento de Química Orgánica I and Centro de Innovación en Química Avanzada (ORFEO-CINQA), Facultad de Ciencias Químicas , Universidad Complutense de Madrid , 28040 - Madrid , Spain.
Abstract:
The factors controlling the reactivity of the strained-alkyne embedded cycloparaphenylenes have been computationally explored by means of Density Functional Theory calculations. To this end, the Diels-Alder cycloaddition reaction involving cyclopentadiene and these macrocyclic systems has been selected in order to understand the influence of the strained nature of the alkyne in their structures as well as the size of the system on their reactivity. It is found that the cycloaddition reactions involving those macrocycles having more strained alkynes not only are more exothermic and exhibit lower activation barriers but also are associated with earlier transition states. The combination of the Activation Strain Model of reactivity and the Energy Decomposition Analysis method suggests that the enhanced reactivity of bent alkynes, as compared to linear C≡C triple bonds, finds its origin not only in the lower deformation energy required to adopt the corresponding transition state structure but also in the stronger interaction energy between the deformed reactants.
Related Concept Videos
Nomenclature of Alkynes
Acidity of 1-Alkynes
The acidic strength of hydrocarbons follows the order: Alkynes > Alkenes > Alkanes. The strength of an acid is commonly expressed in units of pKa — the lower the pKa, the stronger the acid. Among the hydrocarbons, terminal alkynes have lower pKa values and are, therefore, more acidic. For example, the pKa values for ethane, ethene, and acetylene are 51, 44, and 25, respectively, as shown here.
Preparation of Alkynes: Dehydrohalogenation
Alkynes can be prepared by dehydrohalogenation of vicinal or geminal dihalides in the presence of a strong base like sodium amide in liquid ammonia. The reaction proceeds with the loss of two equivalents of hydrogen halide (HX) via two successive E2 elimination reactions.
Cross-reactivity
Reactivity of Enols
Mass Spectrometry: Alkyne Fragmentation

