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SPar-K: a method to partition NGS signal data.

Romain Groux1,2, Philipp Bucher1,2

  • 1The Swiss Institute for Experimental Cancer Research (ISREC), Swiss Federal Institute of Technology Lausanne (EPFL), Lausanne 1015, Switzerland.

Bioinformatics (Oxford, England)
|May 23, 2019
PubMed
Summary

We developed Signal Partitioning with K-means (SPar-K), a novel method to identify typical chromatin structures. This approach effectively handles diverse data, including misalignments and unknown pattern orientations, for better genomic region analysis.

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