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Scaling the Poisson GLM to massive neural datasets through polynomial approximations
David M Zoltowski1, Jonathan W Pillow2
1Princeton Neuroscience Institute, Princeton University; Princeton, NJ 08544.
Advances in Neural Information Processing Systems
|June 28, 2019
Summary
New scalable methods analyze large-scale neural recordings efficiently. This approach uses Poisson generalized linear models (GLMs) and polynomial approximations for accurate inference on complex brain activity data.
Area of Science:
- Computational Neuroscience
- Statistical Modeling
- Neurotechnology
Background:
- Large-scale neural recordings capture activity from thousands of neurons.
- Existing statistical methods struggle with the high dimensionality of this data.
- Efficient analysis is crucial for understanding complex brain functions.
Purpose of the Study:
- Develop scalable approximate inference methods for Poisson generalized linear models (GLMs).
- Adapt polynomial approximation techniques for efficient neural data analysis.
- Enable accurate statistical inference on high-dimensional neural datasets.
Main Methods:
- Utilized polynomial approximations for approximate sufficient statistics in Poisson GLMs.
- Employed quadratic approximations for nonlinear terms in the log-likelihood with Gaussian priors.
- Derived closed-form solutions for estimates and posterior distributions.
- Introduced an adaptive procedure for selecting polynomial approximation intervals.
Main Results:
- Developed a highly scalable method requiring only a single pass over the data.
- Achieved efficient and accurate inference and regularization of high-dimensional parameters.
- Successfully fitted a fully-coupled Poisson GLM to 831 mouse neurons over 41 minutes.
- Analyzed over 2 billion spike count bins, identifying fine-timescale neural dependencies.
Conclusions:
- The proposed methods offer efficient and accurate analysis of large-scale neural recordings.
- This approach advances statistical methods for neural data analysis.
- Enables deeper understanding of neural circuit dynamics and information processing.
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