Shape from focus based on 3D structure tensor using optical microscopy

Shape from focus (SFF) is a widely used passive optical method for 3D shape reconstruction. In SFF, a focus measure, which is used to estimate the relative focus level, plays a critical role in depth estimation. In this article, we present a new focus measure for accurate 3D shape estimation in optical microscopy based on the analysis of 3D structure tensor. First, the 3D tensors are computed from the input image sequence for each pixel. Then, each tensor is decomposed into point, curve, and surface tensors by decomposing tensors into eigenvalues and eigenvectors. Finally, the surfaceness is used to measure the quality of sharpness. The proposed focus measure provides accurate focus values and better resistance against noise. The proposed measure is evaluated by conducting experiments using image sequences of simulated and microscopic real objects. The comparative analysis demonstrates the effectiveness of the proposed focus measure in recovering 3D shape.