Related Experiment Video
Updated: Dec 30, 2025

Chemoselective Modification of Viral Surfaces via Bioorthogonal Click Chemistry
Published on: August 19, 2012
Unexpected Reactions of Terminal Alkynes in Targeted "Click Chemistry'' Coppercatalyzed Azide-alkyne Cycloadditions
Tammar H Ali1, Thorsten Heidelberg1, Rusnah S D Hussen1
1Department of Chemistry, Faculty of Science, University of Malaya, Kuala Lumpur, Malaysia.
Background:
High efficiency in terms of reaction yield and purity has led to the extensive utilization of copper-catalyzed azide-alkyne cycloaddition (CuAAC) in various fields of chemistry. Its compatibility with low molecular weight alcohols promotes the application in surfactant synthesis to tackle the miscibility constraints of the reactants.
Objective:
For the tuning of surfactant properties, double click coupling of the antipode precursors was attempted. Failure of the CuAAC to provide the targeted product in combination with unexpected reaction outputs led to an investigation of the side reaction.
Methods:
The CuAAC-based coupling of sugar azide with propargyl building block in the presence of copper- (I) catalyst exclusively led to the mono-coupling product in a respectable yield of almost 80%. Besides the unexpected incomplete conversion, the loss of the remaining propargyl group, as indicated by both NMR and MS. On the other hand, application of substantial amounts of CuSO4 under reducing conditions in refluxing toluene/water furnished the alkyne dimer in a moderate yield of 43%, while no change of azide compound was noticed.
Results:
The Cu(I)-catalyst applied for azide-alkyne cycloadditions enables the homo-coupling of certain terminal alkynes at a higher temperature. Moreover, aromatic propargyl ethers may be cleaved to furnish the corresponding phenol. The copper-catalyzed coupling appeared highly sensitive towards the alkyne compound. Only selected derivatives of propargyl alcohol were successfully dimerized.
Conclusions:
The observed failure of the Huisgen reaction for the synthesis of sugar-based surfactants may indicate non-recognized constrains of the reaction, which could affect its wide application in bioconjugation. The temperature requirement for the alternative dimerization of terminal alkynes renders this side reaction nonrelevant for typical click couplings, while narrow substrate diversity and moderate yield limit its synthetic application.
More Related Videos
09:35Preparation of a Corannulene-functionalized Hexahelicene by CopperI-catalyzed Alkyne-azide Cycloaddition of Nonplanar Polyaromatic Units
Published on: September 18, 2016
07:50Efficient Synthesis of All-Carbon Quaternary Centers via the Conjugate Addition of Functionalized Monoorganozinc Bromides
Published on: May 26, 2019
Related Concept Videos
Preparation of Alkynes: Alkylation Reaction
Alkylation of terminal alkynes with primary alkyl halides in the presence of a strong base like sodium amide is one of the common methods for the synthesis of longer carbon-chain alkynes. For example, treatment of 1-propyne with sodium amide followed by reaction with ethyl bromide yields 2-pentyne.
Cycloaddition Reactions: Overview
Electrophilic Addition to Alkynes: Halogenation
Halogenation is another class of electrophilic addition reactions where a halogen molecule gets added across a π bond. In alkynes, the presence of two π bonds allows for the addition of two equivalents of halogens (bromine or chlorine). The addition of the first halogen molecule forms a trans-dihaloalkene as the major product and the cis isomer as the minor product. Subsequent addition of the second equivalent yields the tetrahalide.
Alkynes to Aldehydes and Ketones: Hydroboration-Oxidation
One of the convenient methods for the preparation of aldehydes and ketones is via hydration of alkynes. Hydroboration-oxidation of alkynes is an indirect hydration reaction in which an alkyne is treated with borane followed by oxidation with alkaline peroxide to form an enol that rapidly converts into an aldehyde or a ketone. Terminal alkynes form aldehydes, whereas internal alkynes give ketones as the final product.
Electrophilic Addition to Alkynes: Hydrohalogenation
Cycloaddition Reactions: MO Requirements for Thermal Activation