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In Vitro Disassembly of Influenza A Virus Capsids by Gradient Centrifugation
Published on: March 27, 2016
The Structure, Function, and Pathobiology of the Influenza A and B Virus Ion Channels
1Department of Molecular Biosciences, Howard Hughes Medical Institute, Northwestern University, Evanston, Illinois 60208-3500, USA.
Abstract:
Influenza A virus AM2 protein is an integral membrane protein that is an ion channel (also known as a viroporin). The channel has 24 extracellular residues, 19 residues that span the membrane once and acts as both the channel pore and also the membrane anchoring domain, and a 54-residue cytoplasmic tail. The M2 protein has four identical chains linked via two disulfide bonds that form a four-helix bundle that is 107-108 more permeable to protons than Na+ ions. The M2 channel is activated by low pH, His residue 37 is the pH sensor, and Trp residue 41 is the channel gate. The channel is blocked by the antiviral drug amantadine hydrochloride. The influenza B virus BM2 protein does not have homology with the AM2 channel, but BM2 does have the His proton sensor, Trp gate, and is activated by low pH. It is thought that the AM2 and BM2 proteins have common functions in the influenza A and B virus life cycles. Both BM2 and AM2 also facilitate virus budding. The amphipathic helix in the AM2 cytoplasmic tail has an important role in the assembly of the virus, and functional AM2 protein makes the virus independent of the "endosomal sorting complex required for transport" (ESCRT) complex scission.
Insights
Influenza A and B viruses utilize M2 proteins as proton channels. These channels are crucial for virus replication, assembly, and budding, and are targeted by antiviral drugs.
Area of Science:
- Virology
- Structural Biology
- Membrane Protein Function
Background:
- Influenza A virus M2 (AM2) protein functions as a proton-selective ion channel (viroporin).
- AM2 protein features extracellular residues, a transmembrane domain, and a cytoplasmic tail, forming a four-helix bundle.
- AM2 channel activity is pH-dependent, with His37 as the sensor and Trp41 as the gate, and is inhibited by amantadine hydrochloride.
Purpose of the Study:
- To elucidate the structural and functional characteristics of influenza A virus M2 (AM2) and influenza B virus BM2 proteins.
- To investigate the conserved functions of AM2 and BM2 proteins in viral life cycles.
- To understand the role of AM2 in virus assembly and independence from the ESCRT complex.
Main Methods:
- Structural analysis of the AM2 protein's four-helix bundle.
- Functional characterization of proton channel activity and pH gating.
- Investigation of AM2's role in virus budding and ESCRT-independent scission.
Main Results:
- AM2 forms a proton channel with high selectivity over Na+ ions.
- His37 and Trp41 residues are critical for pH sensing and channel gating, respectively.
- AM2 facilitates virus budding and enables ESCRT-independent virus release.
Conclusions:
- AM2 and BM2 proteins share functional similarities, including proton sensing and gating mechanisms.
- AM2 protein plays a vital role in influenza virus assembly, budding, and replication.
- Targeting the M2 channel with drugs like amantadine hydrochloride is a viable antiviral strategy.
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