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Updated: Dec 29, 2025

A Duplex Digital PCR Assay for Simultaneous Quantification of the Enterococcus spp. and the Human Fecal-associated HF183 Marker in Waters
Published on: March 9, 2016
Tracking faecal microorganisms using the qPCR method in a typical urban catchment in China
Lei Chen1, Xiaoyue Zhang1, Xiaosha Zhi1,2
1State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, Beijing, 100875, People's Republic of China.
Dog, bird, and human waste are key sources of urban stormwater pollution. This study used qPCR to identify Bacteroidetes, finding dog waste is the largest contributor to faecal pollution in runoff.
Area of Science:
- Environmental microbiology
- Urban hydrology
- Public health
Background:
- Faecal microorganisms in urban runoff pose significant risks to human health.
- Identifying sources of microbial contamination is crucial for effective water management.
Purpose of the Study:
- To evaluate the origins of faecal microbial contamination in urban stormwater runoff.
- To determine the relative contributions of different animal and human sources to pollution.
Main Methods:
- Quantitative polymerase chain reaction (qPCR) to detect Bacteroidetes as an indicator organism.
- Principal component analysis (PCA) to analyze environmental factors influencing pollution.
Main Results:
- Dog waste was identified as the largest contributor to faecal pollution in stormwater runoff, followed by bird and human sources.
- Human and dog pollutants exhibited a 'first flush' effect, while bird pollutant transmission was longer.
- Antecedent drying days were a key factor for dog faecal pollution; human pollution was influenced by multiple factors.
Conclusions:
- Understanding the sources and transport of faecal pollution is essential for urban water management.
- This research provides evidence for targeted strategies to mitigate nonpoint source faecal pollution in urban catchments.
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