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Proteomic Profile of EPS-Urine through FASP Digestion and Data-Independent Analysis
Published on: May 8, 2021
Bioinformatics for Renal and Urinary Proteomics: Call for Aggrandization
Piby Paul1, Vimala Antonydhason2, Judy Gopal3
1St. Jude Childrens Cancer Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA.
Urine is a valuable, noninvasive resource for diagnosing diseases. This review highlights limited bioinformatics tools for urinary and renal proteomics, urging more development for kidney disease research.
Area of Science:
- Proteomics
- Bioinformatics
- Clinical Diagnostics
Background:
- Urine sampling is noninvasive, yielding large volumes suitable for disease diagnosis.
- Urinary and renal proteomics offer significant advancements in kidney disease diagnosis and treatment via biomarker discovery.
Purpose of the Study:
- To review available bioinformatics tools for urinary and renal proteomics.
- To summarize milestones achieved using these tools in clinical research.
- To identify gaps and encourage further development in this specialized field.
Main Methods:
- Literature review of bioinformatics tools and applications in renal and urinary proteomics.
- Analysis of research publications and available bioinformatic tool options.
- Consolidation of bioinformatics applications specifically for renal and urinary proteomics.
Main Results:
- Significant progress has been made in kidney disease diagnosis through proteomics.
- There is a scarcity of research publications and bioinformatics tools for urinary and renal proteomics.
- A notable gap exists in the availability of specialized bioinformatics tools for this field.
Conclusions:
- The field of renal and urinary proteomics requires increased attention and input from bioinformaticians.
- There is a clear need for the development of more bioinformatics tools to advance kidney disease research.
- This review is the first to consolidate bioinformatics applications specifically for renal and urinary proteomics, highlighting a promising area for future research.
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