MMHub, a database for the mulberry metabolome.
Dong Li1, Bi Ma1, Xiaofei Xu2
1State Key Laboratory of Silkworm Genome Biology, Southwest University, No. 2, Tiansheng Road, Beibei, Chongqing 400715, China.
Database : the Journal of Biological Databases and Curation
|March 12, 2020
Summary
Researchers developed MMHub, a database of mulberry leaf metabolites. This resource provides mass spectrometry data for 124 identified compounds, aiding in the screening of mulberry resources and metabolites.
Area of Science:
- Plant metabolomics
- Agricultural science
- Traditional medicine
Background:
- Mulberry (Morus spp.) is a vital economic crop and traditional medicine.
- It possesses a rich profile of bioactive compounds, including flavonoids, amino acids, alkaloids, and vitamins.
- Growing interest in mulberry's applications necessitates comprehensive data on its chemical constituents.
Purpose of the Study:
- To establish the first public repository for mass spectral data of small chemical compounds in mulberry leaves.
- To provide a centralized resource for metabolomic analysis of mulberry.
- To facilitate the identification and characterization of mulberry metabolites.
Main Methods:
- Collected 936 electrospray ionization tandem mass spectrometry (ESI-MS2) datasets from 91 mulberry resources.
- Identified or tentatively annotated 124 metabolites.
- Deposited structural details for 90 metabolites in the MMHub database.
- Included supporting data such as PubChem information, molecular formulas, and metabolite classifications.
Main Results:
- The MMHub database (version 1.0) is now publicly accessible.
- It contains ESI-MS2 data and distribution information for 124 identified metabolites in mulberry.
- Detailed chemical structures and spectral tags are available for 90 metabolites.
Conclusions:
- MMHub offers crucial, comprehensive metabolome data for mulberry research.
- This resource supports the screening of high-quality mulberry varieties and specific metabolites.
- It advances the understanding and utilization of mulberry's bioactive compounds.


