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Updated: Dec 25, 2025

Multiplex PCR Assay for Typing of Staphylococcal Cassette Chromosome Mec Types I to V in Methicillin-resistant Staphylococcus aureus
Published on: September 5, 2013
MRSA CC398 recovered from wild boar harboring new SCCmec type IV J3 variant
Margarida Sousa1, Nuno Silva2, Vítor Borges3
1MicroART - Microbiology and Antibiotic Resistance Team, Department of Veterinary Sciences, University of Trás-os-Montes and Alto Douro (UTAD), Vila Real, Portugal; Veterinary and Animal Science Research Center (CECAV), UTAD, Vila Real, Portugal; Functional Genomics and Proteomics Unit, UTAD, Vila Real, Portugal; National Reference Laboratory of Antibiotic Resistances and Healthcare Associated Infections (NRL-AR-HAI), National Institute of Health Dr. Ricardo Jorge (NIH), Lisbon, Portugal; Department of Food and Agriculture, Area of Biochemistry and Molecular Biology, University of La Rioja, Logroño, Spain.
Abstract:
A methicillin-resistant Staphylococcus aureus CC398 was recovered from a wild female boar (Sus scrofa) in the north of Portugal, in 2013 (Sousa et al. 2017). Whole genome sequencing (WGS) revealed this strain carries a new variant of a mecA-containing staphylococcal chromosomal gene cassette (SCCmec) type IV with an uncommon J3 region. WGS studies can facilitate surveillance and provide more detailed characterization of bacterial clones circulating in the wild, reinforcing the need for a one health perspective to better understand and control antimicrobial resistance.
Insights
Methicillin-resistant Staphylococcus aureus (MRSA) CC398 was found in a wild boar in Portugal. Whole genome sequencing identified a novel SCCmec type IV variant, highlighting the need for One Health approaches to track antimicrobial resistance in wildlife.
Area of Science:
- Veterinary Microbiology
- Genomics
- Antimicrobial Resistance Surveillance
Background:
- Methicillin-resistant Staphylococcus aureus (MRSA) is a significant public health concern.
- Wildlife can act as reservoirs for zoonotic pathogens and antimicrobial-resistant bacteria.
- Previous studies have identified MRSA CC398 in livestock, but less is known about its prevalence in wild animals.
Purpose of the Study:
- To report the first recovery of MRSA CC398 from a wild boar in Portugal.
- To characterize the genetic features of the isolated MRSA strain using whole genome sequencing.
- To emphasize the importance of wildlife surveillance in understanding antimicrobial resistance dynamics.
Main Methods:
- Bacterial isolation and identification from a wild boar sample.
- Whole genome sequencing (WGS) of the MRSA isolate.
- Analysis of WGS data to characterize the staphylococcal chromosomal cassette mec (SCCmec) type and other genetic elements.
Main Results:
- A MRSA CC398 strain was successfully isolated from a wild female boar.
- The WGS analysis revealed a novel variant of SCCmec type IV.
- This variant possessed an uncommon J3 region, distinguishing it from previously described SCCmec types.
Conclusions:
- Wild boar can harbor and potentially disseminate MRSA CC398.
- Whole genome sequencing provides valuable insights into the evolution and spread of antimicrobial resistance genes.
- A One Health approach integrating wildlife, livestock, and human surveillance is crucial for effective antimicrobial resistance control.
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