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Updated: Dec 19, 2025

Author Spotlight: RNA FISH for Locating lncRNA-SNHG6 in Osteosarcoma Cells
Published on: June 16, 2023
Aberrant epigenetic silencing of neuronatin is a frequent event in human osteosarcoma
Haleema Saeed1,2, Sayantani Sinha3,4, Christine Mella1
1Division of Pediatric Hematology/Oncology, Akron Childrens Hospital, Akron, OH, USA.
Abstract:
The paternally imprinted neuronatin (NNAT) gene has been identified as a target of aberrant epigenetic silencing in diverse cancers, but no association with pediatric bone cancers has been reported to date. In screening childhood cancers, we identified aberrant CpG island hypermethylation in a majority of osteosarcoma (OS) samples and in 5 of 6 human OS cell lines studied but not in normal bone-derived tissue samples. CpG island hypermethylation was associated with transcriptional silencing in human OS cells, and silencing was reversible upon treatment with 5-aza-2'-deoxycytidine. Expression of NNAT was detectable in osteoblasts and chondrocytes of human bone, supporting a potential role in bone homeostasis. Enforced expression of NNAT in human OS cells lacking endogenous expression resulted in significant reduction in colony formation and in vitro migration compared to nonexpressor control cells. We next analyzed the effect of NNAT expression on intracellular calcium homeostasis and found that was associated with an attenuated decay of calcium levels to baseline following ATP-induced release of calcium from endoplasmic reticulum (ER) stores. Furthermore, NNAT expression was associated with increased cytotoxicity in OS cells from thapsigargin, an inhibitor of calcium reuptake into ER and an inducer of the ER stress response. These results suggest a possible tumor suppressor role for NNAT in human osteosarcoma. Additional study is needed ascertain sensitization to ER stress-associated apoptosis as a mechanism of NNAT-dependent cytotoxicity. In that case, epigenetic modification therapy to effect NNAT transcriptional derepression may represent a therapeutic strategy potentially of benefit to a majority of osteosarcoma patients.
Insights
The neuronatin (NNAT) gene, silenced in many cancers, may act as a tumor suppressor in osteosarcoma. Epigenetic therapy targeting NNAT could benefit patients with this pediatric bone cancer.
Area of Science:
- Oncology
- Epigenetics
- Molecular Biology
Background:
- The neuronatin (NNAT) gene is epigenetically silenced in various cancers.
- Its role in pediatric bone cancers, specifically osteosarcoma (OS), was previously unreported.
Purpose of the Study:
- To investigate the epigenetic status and functional role of the NNAT gene in osteosarcoma.
Main Methods:
- Screening of childhood cancers for NNAT gene alterations.
- Analysis of CpG island hypermethylation and transcriptional silencing in OS samples and cell lines.
- Assessing the impact of NNAT re-expression on OS cell proliferation, migration, calcium homeostasis, and cytotoxicity.
- Treatment of OS cells with 5-aza-2'-deoxycytidine and thapsigargin.
Main Results:
- Aberrant CpG island hypermethylation and silencing of NNAT were identified in a majority of osteosarcoma samples and cell lines, but not in normal bone tissue.
- NNAT hypermethylation and silencing were reversible with 5-aza-2'-deoxycytidine treatment.
- Re-expression of NNAT in OS cells reduced colony formation and migration, modulated intracellular calcium levels, and increased sensitivity to thapsigargin-induced cytotoxicity.
- NNAT expression in osteoblasts and chondrocytes suggests a role in bone homeostasis.
Conclusions:
- NNAT exhibits a potential tumor suppressor role in human osteosarcoma.
- Epigenetic silencing of NNAT is a common event in osteosarcoma.
- Therapeutic strategies involving epigenetic modification to restore NNAT expression may offer a novel treatment approach for osteosarcoma patients.
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