Related Experiment Video
Updated: Dec 15, 2025

Tandem High-pressure Freezing and Quick Freeze Substitution of Plant Tissues for Transmission Electron Microscopy
Published on: October 13, 2014
Imaging Plant Cells by High-Pressure Freezing and Serial block-face scanning electron microscopy
Kirk Czymmek1, Abhilash Sawant2,3, Kaija Goodman4,5
1Advanced Bioimaging Laboratory, Donald Danforth Plant Science Center, St. Louis, MO, USA.
Abstract:
This chapter describes methods to enhanced contrast of plant material processed by high-pressure freezing and freeze substitution for improved visualization by serial block-face scanning electron microscopy (SBEM). The contrast enhancing steps are based on a protocol involving the sequential incubation of samples in heavy metals and sodium thiocarbohydrazide (OTO staining). We also describe the pipeline for imaging plant tissues in a commercial SBEM system (Gatan 3View®) and routines for the image analysis and three-dimensional reconstructions using open-source and commercial software packages.

