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Related Concept Videos

RNA Editing02:23

RNA Editing

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RNA editing is a post-transcriptional modification where a precursor mRNA (pre-mRNA) nucleotide sequence is changed by base insertion, deletion, or modification. The extent of RNA editing varies from a few hundred bases, in mitochondrial DNA of trypanosomes, to a just single base, in nuclear genes of mammals. Even a single base change in the pre-mRNA can convert a codon for one amino acid into the codon for another amino acid or a stop codon. This type of re-coding can significantly affect the...
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Splicing is the process by which eukaryotic RNA is edited before its translation into protein. The RNA strand transcribed from eukaryotic DNA is called the primary transcript. The primary transcripts that become mRNAs are called precursor messenger RNAs (pre-mRNAs). Eukaryotic pre-mRNA contains alternating sequences of exons and introns. Exons are nucleotide sequences that code for proteins, whereas introns are the non-coding regions. In RNA splicing, introns are removed and exons are bonded...
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Ribosome Profiling

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Ribosome profiling or ribo-sequencing is a deep sequencing technique that produces a snapshot of active translation in a cell. It selectively sequences the mRNAs protected by ribosomes to get an insight into a cell’s translation landscape at any given point in time.
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Alternative RNA Splicing02:18

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Alternative RNA splicing is the regulated splicing of exons and introns to produce different mature mRNAs from a single pre-mRNA. Unlike in constitutive splicing where a single gene produces a single type of mRNA, alternative splicing allows an organism to produce multiple proteins from a single gene and plays an important role in protein diversity.
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Pre-mRNA Processing: Modification of pre-mRNA Ends01:35

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In eukaryotic cells, transcripts made by RNA polymerase are modified and processed before exiting the nucleus. Unprocessed RNA is called precursor mRNA or pre-mRNA to distinguish it from mature mRNA.
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A Nonsequencing Approach for the Rapid Detection of RNA Editing
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A Nonsequencing Approach for the Rapid Detection of RNA Editing

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Proteome Diversification by RNA Editing.

Eli Eisenberg1

  • 1Raymond and Beverly Sackler School of Physics and Astronomy and Sagol School of Neuroscience, Tel Aviv University, Tel Aviv, Israel. elieis@post.tau.ac.il.

Methods in Molecular Biology (Clifton, N.J.)
|July 31, 2020
PubMed
Summary
This summary is machine-generated.

RNA editing, particularly A-to-I changes by ADAR enzymes, creates protein diversity. Thousands of recoding sites are found across species, highlighting their evolutionary significance.

Keywords:
ADARRNA editingRecoding

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Area of Science:

  • Molecular Biology
  • Genomics
  • Evolutionary Biology

Background:

  • RNA editing modifies RNA sequences, diverging from the genomic blueprint.
  • Adenosine to Inosine (A-to-I) editing, mediated by ADAR enzymes, is the most prevalent form.
  • Recoding sites within RNA can lead to altered protein products, increasing proteomic complexity.

Purpose of the Study:

  • To describe the phenomenon of RNA recoding across different species.
  • To explore the role of recoding in biological diversity and adaptation.
  • To discuss the evolutionary aspects of RNA recoding.

Main Methods:

  • Computational transcriptomic analyses to identify recoding sites.
  • Comparative genomics to assess conservation of recoding sites across lineages.
  • Literature review and synthesis of existing research on RNA editing and evolution.

Main Results:

  • Thousands of recoding sites have been identified in multiple species.
  • Many recoding sites are conserved within species lineages but not typically across them.
  • These sites possess functional and evolutionary importance.

Conclusions:

  • RNA recoding significantly contributes to proteome complexity and diversification.
  • Recoding sites play a crucial role in species adaptation and evolution.
  • Understanding recoding mechanisms is key to comprehending genome evolution and biological novelty.