Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Model Approaches for Pharmacokinetic Data: Distributed Parameter Models01:06

Model Approaches for Pharmacokinetic Data: Distributed Parameter Models

192
Pharmacokinetic models are mathematical constructs that represent and predict the time course of drug concentrations in the body, providing meaningful pharmacokinetic parameters. These models are categorized into compartment, physiological, and distributed parameter models.
The distributed parameter models are specifically designed to account for variations and differences in some drug classes. This model is particularly useful for assessing regional concentrations of anticancer or...
192
Physiological Pharmacokinetic Models: Blood Flow-Limited Versus Diffusion-Limited Models00:57

Physiological Pharmacokinetic Models: Blood Flow-Limited Versus Diffusion-Limited Models

243
Physiological pharmacokinetic models, often called flow-limited or perfusion models, typically assume a swift drug distribution between tissue and venous blood, creating a rapid drug equilibrium. This premise is based on the idea that drug diffusion is extremely fast, and the cell membrane presents no barrier to drug permeation. In this scenario, where no drug binding occurs, the drug concentration in the tissue equals that of the venous blood leaving the tissue. This greatly simplifies the...
243
Genetic Drift03:33

Genetic Drift

42.6K
Natural selection—probably the most well-known evolutionary mechanism—increases the prevalence of traits that enhance survival and reproduction. However, evolution does not merely propagate favorable traits, nor does it always benefit populations.
42.6K
Analysis Methods of Pharmacokinetic Data: Model and Model-Independent Approaches01:14

Analysis Methods of Pharmacokinetic Data: Model and Model-Independent Approaches

375
Drug disposition in the body is a complex process and can be studied using two major approaches: the model and the model-independent approaches.
The model approach uses mathematical models to describe changes in drug concentration over time. Pharmacokinetic models help characterize drug behavior in patients, predict drug concentration in the body fluids, calculate optimum dosage regimens, and evaluate the risk of toxicity. However, ensuring that the model fits the experimental data accurately...
375
Pharmacokinetic Models: Overview01:20

Pharmacokinetic Models: Overview

1.7K
Pharmacokinetic models utilize mathematical analysis to achieve a detailed quantitative understanding of a drug's life cycle within the body. They are instrumental in simulating a drug's pharmacokinetic parameters, predicting drug concentrations over time, optimizing dosage regimens, linking concentrations with pharmacologic activity, and estimating potential toxicity.
There are three primary types of models: empirical, compartment, and physiological. Empirical models, with minimal...
1.7K
Multicompartment Models: Overview01:14

Multicompartment Models: Overview

408
Multicompartment models are mathematical constructs that depict how drugs are distributed and eliminated within the body. They segment the body into several compartments, symbolizing various physiological or anatomical areas connected through drug transfer processes such as absorption, metabolism, distribution, and elimination.
These models offer a more comprehensive representation of drug behavior in the body than one-compartment models. They accommodate the complexity of drug distribution,...
408

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

A low-variance subspace underlies individual differences in resting state fMRI.

bioRxiv : the preprint server for biology·2026
Same author

Thalamic regulation of reinforcement learning strategies across prefrontal-striatal networks.

Nature communications·2025
Same author

Mapping the visual cortex with Zebra noise and wavelets.

bioRxiv : the preprint server for biology·2025
Same author

Learning decouples accuracy and reaction time for rapid decisions in a transitive inference task.

bioRxiv : the preprint server for biology·2025
Same author

The impact of functional correlations on task information coding.

Network neuroscience (Cambridge, Mass.)·2024
Same author

Human brain state dynamics are highly reproducible and associated with neural and behavioral features.

PLoS biology·2024
Same journal

The exquisite mechanics of a tsetse bite.

eLife·2026
Same journal

Distinct involvements of the subthalamic nucleus subpopulations in reward-biased decision-making in monkeys.

eLife·2026
Same journal

Pink1-mediated mitophagy in the endothelium releases proteins encoded by mitochondrial DNA and activates neutrophil responses during inflammation.

eLife·2026
Same journal

Restraint of melanoma progression by cells in the local skin environment.

eLife·2026
Same journal

Brawn before bite in endemic Asian eutherian mammals after the end-Cretaceous extinction.

eLife·2026
Same journal

Experimental evolution to thermal stress indicates climate resilience in a cosmopolitan arthropod.

eLife·2026
See all related articles

Related Experiment Video

Updated: Dec 13, 2025

Single-Molecule Tracking Microscopy - A Tool for Determining the Diffusive States of Cytosolic Molecules
10:20

Single-Molecule Tracking Microscopy - A Tool for Determining the Diffusive States of Cytosolic Molecules

Published on: September 5, 2019

8.6K

A flexible framework for simulating and fitting generalized drift-diffusion models.

Maxwell Shinn1,2, Norman H Lam3, John D Murray1,2,3

  • 1Department of Psychiatry, Yale University, New Haven, United States.

Elife
|August 5, 2020
PubMed
Summary
This summary is machine-generated.

We introduce a generalized drift-diffusion model (GDDM) framework to overcome limitations in decision-making models. This innovation allows for faster, more accurate analysis of cognitive neuroscience data.

Keywords:
computational modeldecision makingdrift-diffusion modelmodel fittingneurosciencenonepsychophysicsresponse time

More Related Videos

Synthesis of Cyclic Polymers and Characterization of Their Diffusive Motion in the Melt State at the Single Molecule Level
06:55

Synthesis of Cyclic Polymers and Characterization of Their Diffusive Motion in the Melt State at the Single Molecule Level

Published on: September 26, 2016

8.3K
Image Processing Protocol for the Analysis of the Diffusion and Cluster Size of Membrane Receptors by Fluorescence Microscopy
12:15

Image Processing Protocol for the Analysis of the Diffusion and Cluster Size of Membrane Receptors by Fluorescence Microscopy

Published on: April 9, 2019

9.0K

Related Experiment Videos

Last Updated: Dec 13, 2025

Single-Molecule Tracking Microscopy - A Tool for Determining the Diffusive States of Cytosolic Molecules
10:20

Single-Molecule Tracking Microscopy - A Tool for Determining the Diffusive States of Cytosolic Molecules

Published on: September 5, 2019

8.6K
Synthesis of Cyclic Polymers and Characterization of Their Diffusive Motion in the Melt State at the Single Molecule Level
06:55

Synthesis of Cyclic Polymers and Characterization of Their Diffusive Motion in the Melt State at the Single Molecule Level

Published on: September 26, 2016

8.3K
Image Processing Protocol for the Analysis of the Diffusion and Cluster Size of Membrane Receptors by Fluorescence Microscopy
12:15

Image Processing Protocol for the Analysis of the Diffusion and Cluster Size of Membrane Receptors by Fluorescence Microscopy

Published on: April 9, 2019

9.0K

Area of Science:

  • Cognitive Neuroscience
  • Computational Neuroscience
  • Mathematical Psychology

Background:

  • The drift-diffusion model (DDM) is a cornerstone for understanding decision-making processes.
  • Methodological hurdles have historically constrained the development of novel DDM extensions.
  • Existing DDM frameworks lack the flexibility to incorporate complex, user-defined functions.

Purpose of the Study:

  • To introduce the generalized drift-diffusion model (GDDM) framework, enabling the creation and fitting of advanced DDM variants.
  • To provide a software package that implements the GDDM framework for practical application.
  • To facilitate innovation in decision-making models and experimental designs.

Main Methods:

  • The GDDM framework extends traditional DDM parameters using arbitrary user-defined functions.
  • Numerical solutions are obtained by directly solving the Fokker-Planck equation with efficient numerical methods.
  • A significant speedup (≥100x) over standard methods is achieved, enabling maximum likelihood fitting on the complete response time (RT) distribution.

Main Results:

  • The GDDM framework was successfully applied to fit both animal and human datasets from perceptual decision-making tasks.
  • GDDMs demonstrated superior accuracy and required fewer parameters compared to existing state-of-the-art DDMs.
  • The framework facilitates testing of complex decision-making mechanisms.

Conclusions:

  • The GDDM framework significantly advances the flexibility and efficiency of decision-making modeling in cognitive neuroscience.
  • This approach overcomes previous methodological limitations, paving the way for novel theoretical and experimental investigations.
  • The provided software package democratizes the use of advanced DDM extensions for researchers.