Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Predicting Molecular Geometry02:27

Predicting Molecular Geometry

43.3K
VSEPR Theory for Determination of Electron Pair Geometries
43.3K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

The elusive <i>endo</i>-product of the archetypal Diels-Alder reaction of furan and maleic anhydride - observed in the solid state at last.

Chemical science·2026
Same author

Accelerating Prediction of Complex Molecular Crystals by Sensible Selection of Asymmetric Units.

Journal of chemical theory and computation·2026
Same author

Fast Molecular Crystal Structure Prediction Using Sampling by Analogy to Previously Predicted Landscapes.

Journal of chemical theory and computation·2026
Same author

Continuous invariant-based asymmetries of periodic crystals quantify deviations from higher symmetry.

IUCrJ·2026
Same author

Can Machine Learning Predict the Space Group Preference of Organic Molecules?

Crystal growth & design·2026
Same author

Folate Receptor Alpha (FRα) and the Developing Brain: From Molecular Function to Neurodevelopmental Outcomes.

Molecular neurobiology·2026
Same journal

Stability of Some Ternary 13-Atom Icosahedral Clusters Assessed with Geometric, Electronic, and Thermodynamic Criteria.

The journal of physical chemistry. A·2026
Same journal

A Three-Phase Distribution Method for Quantifying the Intermolecular Interactions.

The journal of physical chemistry. A·2026
Same journal

Cooperative Effects in the Inverse Coordination Complexes of Aromatic Azines and Tin(IV) Halides.

The journal of physical chemistry. A·2026
Same journal

The Infrared Spectra of Neutral Dimethyl-Sulfide, -Disulfide and -Sulfoxide Biomarkers in Molecular Beams.

The journal of physical chemistry. A·2026
Same journal

Photoinduced Charge-Transfer Suppresses Triplet Formation Efficiency in Thiocoumarins: Evidence from Ultrafast Spectroscopy and Theoretical Calculations.

The journal of physical chemistry. A·2026
Same journal

Porphyrin Aggregation Revisited: From the Four-Orbital Gouterman Model to an Eight-Orbital Framework in Porphin H-Dimers.

The journal of physical chemistry. A·2026
See all related articles

Related Experiment Video

Updated: Dec 10, 2025

A Protocol for Computer-Based Protein Structure and Function Prediction
16:41

A Protocol for Computer-Based Protein Structure and Function Prediction

Published on: November 3, 2011

69.5K

Multifidelity Statistical Machine Learning for Molecular Crystal Structure Prediction.

Olga Egorova1, Roohollah Hafizi2, David C Woods1

  • 1Statistical Sciences Research Institute, University of Southampton, Southampton, SO17 1BJ, U.K.

The Journal of Physical Chemistry. A
|September 4, 2020
PubMed
Summary
This summary is machine-generated.

This study uses machine learning to predict accurate crystal structure energies, significantly reducing computational costs for materials science research. The approach efficiently ranks crystal structures by predicting expensive DFT calculations using less intensive methods.

More Related Videos

Author Spotlight: A Computational Approach to Decipher Amino Acid Preferences in Multispecific Protein-Protein Interactions
06:50

Author Spotlight: A Computational Approach to Decipher Amino Acid Preferences in Multispecific Protein-Protein Interactions

Published on: January 26, 2024

2.3K
Crystallization and Structural Determination of an Enzyme:Substrate Complex by Serial Crystallography in a Versatile Microfluidic Chip
10:45

Crystallization and Structural Determination of an Enzyme:Substrate Complex by Serial Crystallography in a Versatile Microfluidic Chip

Published on: March 20, 2021

8.7K

Related Experiment Videos

Last Updated: Dec 10, 2025

A Protocol for Computer-Based Protein Structure and Function Prediction
16:41

A Protocol for Computer-Based Protein Structure and Function Prediction

Published on: November 3, 2011

69.5K
Author Spotlight: A Computational Approach to Decipher Amino Acid Preferences in Multispecific Protein-Protein Interactions
06:50

Author Spotlight: A Computational Approach to Decipher Amino Acid Preferences in Multispecific Protein-Protein Interactions

Published on: January 26, 2024

2.3K
Crystallization and Structural Determination of an Enzyme:Substrate Complex by Serial Crystallography in a Versatile Microfluidic Chip
10:45

Crystallization and Structural Determination of an Enzyme:Substrate Complex by Serial Crystallography in a Versatile Microfluidic Chip

Published on: March 20, 2021

8.7K

Area of Science:

  • Computational materials science
  • Statistical machine learning
  • Solid-state chemistry

Background:

  • Predicting crystal structures requires accurate energies from first-principles calculations, often using density functional theory (DFT).
  • High-throughput screening of numerous crystal structures is computationally prohibitive due to the cost of accurate DFT methods.
  • Existing methods struggle to balance accuracy and computational expense for large-scale structure prediction.

Purpose of the Study:

  • To develop a cost-effective machine learning approach for predicting accurate DFT energies of crystal structures.
  • To enable efficient ranking and assessment of low-energy crystal structures.
  • To reduce the computational burden of first-principles materials discovery.

Main Methods:

  • A multifidelity machine learning approach using autoregressive Gaussian processes.
  • Utilizing inexpensive force field and GGA DFT (PBE) calculations to bridge to expensive hybrid DFT (PBE0) energies.
  • Benchmarking on crystal structure landscapes of three small, hydrogen-bonded organic molecules.

Main Results:

  • Accurate prediction of PBE0 energies with errors < 1 kJ mol⁻¹.
  • Achieved energy predictions at 4.2–6.8% of the cost of full PBE0 calculations.
  • Demonstrated accurate prediction of crystal structure energies and ranking.

Conclusions:

  • The developed probabilistic machine learning model accurately predicts crystal structure energies and rankings cost-effectively.
  • This approach significantly reduces computational requirements for materials discovery.
  • Understanding prediction uncertainties is crucial for reliable energetic ranking of crystal structures.