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Updated: Dec 7, 2025

Natural Product Discovery with LC-MS/MS Diagnostic Fragmentation Filtering: Application for Microcystin Analysis
Published on: May 31, 2019
LC-MS/MS Method Development for the Discovery and Identification of Amphidinols Produced by Amphidinium
Marvin Wellkamp1, Francisco García-Camacho2, Lorena M Durán-Riveroll3
1Alfred-Wegener-Institut für Polar und Meeresforschung, 27570 Bremerhaven, Germany.
Abstract:
Amphidinols are polyketides produced by dinoflagellates suspected of causing fish kills. Here, we demonstrate a liquid chromatography-tandem mass spectrometry (LC-MS/MS) method for the identification and quantification of amphidinols (AM). Novel AM were detected by neutral loss (NL) scan and then quantified together with known AM by selection reaction monitoring (SRM). With the new method, AM were detected in four of eight analyzed strains with a maximum of 3680 fg toxin content per cell. In total, sixteen novel AM were detected by NL scan and characterized via their fragmentation patterns. Of these, two substances are glycosylated forms. This is the first detection of glycosylated AM.

