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Published on: May 1, 2020
4EHP and GIGYF1/2 Mediate Translation-Coupled Messenger RNA Decay
Ramona Weber1, Min-Yi Chung1, Csilla Keskeny1
1Department of Biochemistry, Max Planck Institute for Developmental Biology, Max-Planck-Ring 5, D-72076 Tübingen, Germany.
Abstract:
Current models of mRNA turnover indicate that cytoplasmic degradation is coupled with translation. However, our understanding of the molecular events that coordinate ribosome transit with the mRNA decay machinery is still limited. Here, we show that 4EHP-GIGYF1/2 complexes trigger co-translational mRNA decay. Human cells lacking these proteins accumulate mRNAs with prominent ribosome pausing. They include, among others, transcripts encoding secretory and membrane-bound proteins or tubulin subunits. In addition, 4EHP-GIGYF1/2 complexes fail to reduce mRNA levels in the absence of ribosome stalling or upon disruption of their interaction with the cap structure, DDX6, and ZNF598. We further find that co-translational binding of GIGYF1/2 to the mRNA marks transcripts with perturbed elongation to decay. Our studies reveal how a repressor complex linked to neurological disorders minimizes the protein output of a subset of mRNAs.
Insights
The 4EHP-GIGYF1/2 complex links ribosome pausing to mRNA decay, reducing protein output. This mechanism targets specific mRNAs, especially those encoding secretory proteins, and is crucial for cellular regulation.
Area of Science:
- Molecular Biology
- Gene Expression Regulation
- Cellular mRNA Turnover
Background:
- mRNA degradation is known to be coupled with translation in the cytoplasm.
- The precise molecular mechanisms coordinating ribosome activity and mRNA decay pathways remain incompletely understood.
Purpose of the Study:
- To investigate the role of 4EHP-GIGYF1/2 complexes in co-translational mRNA decay.
- To elucidate how ribosome transit is coordinated with mRNA decay machinery.
Main Methods:
- Analysis of mRNA accumulation and ribosome pausing in human cells lacking 4EHP-GIGYF1/2 proteins.
- Investigation of 4EHP-GIGYF1/2 complex interactions with mRNA cap structures, DDX6, and ZNF598.
- Assessment of mRNA decay rates in the presence or absence of ribosome stalling and specific protein interactions.
Main Results:
- Human cells deficient in 4EHP-GIGYF1/2 exhibit accumulation of mRNAs with significant ribosome pausing.
- These affected transcripts include those for secretory/membrane proteins and tubulin subunits.
- 4EHP-GIGYF1/2 complex function in mRNA decay is dependent on ribosome stalling and interactions with the cap structure, DDX6, and ZNF598.
Conclusions:
- 4EHP-GIGYF1/2 complexes actively trigger co-translational mRNA decay by targeting mRNAs with perturbed elongation.
- This pathway serves to minimize protein output from specific transcripts, including those implicated in neurological disorders.
- The findings reveal a novel mechanism linking ribosome dynamics to mRNA decay for fine-tuning gene expression.
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