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Updated: Dec 3, 2025

An Integrated Approach for Microprotein Identification and Sequence Analysis
Published on: July 12, 2022
AlignmentViewer: Sequence Analysis of Large Protein Families
Roc Reguant1,2,3, Yevgeniy Antipin4, Rob Sheridan5
1Department of Informatics, Technical University of Munich, Munich, Germany.
Abstract:
AlignmentViewer is a web-based tool to view and analyze multiple sequence alignments of protein families. The particular strengths of AlignmentViewer include flexible visualization at different scales as well as analysis of conservation patterns and of the distribution of proteins in sequence space. The tool is directly accessible in web browsers without the need for software installation. It can handle protein families with tens of thousands of sequences and is particularly suitable for evolutionary coupling analysis, e.g. via EVcouplings.org.
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