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Published on: March 25, 2020
Substrate specificity of bacterial endoribonuclease toxins
1Department of Life Sciences, Korea University, Seoul 02481, Korea.
Abstract:
Bacterial endoribonuclease toxins belong to a protein family that inhibits bacterial growth by degrading mRNA or rRNA sequences. The toxin genes are organized in pairs with its cognate antitoxins in the chromosome and thus the activities of the toxins are antagonized by antitoxin proteins or RNAs during active translation. In response to a variety of cellular stresses, the endoribonuclease toxins appear to be released from antitoxin molecules via proteolytic cleavage of antitoxin proteins or preferential degradation of antitoxin RNAs and cleave a diverse range of mRNA or rRNA sequences in a sequence-specific or codon-specific manner, resulting in various biological phenomena such as antibiotic tolerance and persister cell formation. Given that substrate specificity of each endoribonuclease toxin is determined by its structure and the composition of active site residues, we summarize the biology, structure, and substrate specificity of the updated bacterial endoribonuclease toxins. [BMB Reports 2020; 53(12): 611-621].
Insights
Bacterial endoribonuclease toxins degrade RNA to inhibit growth, but are controlled by antitoxins. Cellular stress releases toxins, impacting antibiotic tolerance and persister cell formation.
Area of Science:
- Molecular Biology
- Bacteriology
- Biochemistry
Background:
- Bacterial endoribonuclease toxins are proteins that inhibit growth by degrading RNA.
- Toxin activity is regulated by cognate antitoxins (proteins or RNAs).
- Stress conditions trigger toxin release and RNA degradation.
Purpose of the Study:
- To summarize the biology, structure, and substrate specificity of bacterial endoribonuclease toxins.
- To provide an updated overview of these important bacterial toxins.
Main Methods:
- Literature review and synthesis of existing research.
- Analysis of structural and biochemical data on endoribonuclease toxins.
- Focus on sequence-specific and codon-specific RNA cleavage mechanisms.
Main Results:
- Endoribonuclease toxins cleave mRNA or rRNA in a sequence- or codon-specific manner.
- Toxin activity is modulated by antitoxin binding and release.
- Toxin-mediated RNA degradation leads to phenomena like antibiotic tolerance and persister cell formation.
Conclusions:
- The structure and active site residues dictate the substrate specificity of these toxins.
- Understanding these toxins is crucial for deciphering bacterial survival strategies.
- Further research into bacterial endoribonuclease toxins can inform antibiotic development.
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