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A Reporter Assay to Analyze Intronic microRNA Maturation in Mammalian Cells
Published on: June 16, 2022
Involvement of miR-190b in Xbp1 mRNA Splicing upon Tocotrienol Treatment
Roberto Ambra1, Sonia Manca1, Guido Leoni1
1Council for Agricultural Research and Economics-Research Centre for Food and Nutrition, via Ardeatina 546, 00178 Rome, Italy.
Abstract:
We previously demonstrated that apoptosis induced by tocotrienols (γ and δT3) in HeLa cells is preceded by Ca2+ release from the endoplasmic reticulum. This event is eventually followed by the induction of specific calcium-dependent signals, leading to the expression and activation of the gene encoding for the IRE1α protein and, in turn, to the alternative splicing of the pro-apoptotic protein sXbp1 and other molecules involved in the unfolded protein response, the core pathway coping with EndoR stress. Here, we showed that treatment with T3s induces the expression of a specific set of miRNAs in HeLa cells. Data interrogation based on the intersection of this set of miRNAs with a set of genes previously differentially expressed after γT3 treatment provided a few miRNA candidates to be the effectors of EndoR-stress-induced apoptosis. To identify the best candidate to act as the effector of the Xbp1-mediated apoptotic response to γT3, we performed in silico analysis based on the evaluation of the highest ∆ in Gibbs energy of different mRNA-miRNA-Argonaute (AGO) protein complexes. The involvement of the best candidate identified in silico, miR-190b, in Xbp1 splicing was confirmed in vitro using T3-treated cells pre-incubated with the specific miRNA inhibitor, providing a preliminary indication of its role as an effector of EndoR-stress-induced apoptosis.
Insights
Tocotrienols induce apoptosis by triggering calcium release and endoplasmic reticulum stress in HeLa cells. MiR-190b emerges as a key microRNA effector in this tocotrienol-induced apoptotic pathway.
Area of Science:
- Cell Biology
- Molecular Biology
- Biochemistry
Background:
- Tocotrienols (T3s) induce apoptosis in HeLa cells via endoplasmic reticulum (ER) calcium release.
- This process involves calcium-dependent signals, IRE1α activation, and the unfolded protein response (UPR).
Purpose of the Study:
- To identify microRNAs (miRNAs) involved in tocotrienol-induced apoptosis.
- To determine the specific role of miR-190b in the Xbp1-mediated apoptotic response to tocotrienols.
Main Methods:
- Analysis of miRNA expression in T3-treated HeLa cells.
- In silico analysis of mRNA-miRNA-Argonaute (AGO) complexes to predict miRNA function.
- In vitro confirmation of miR-190b involvement using miRNA inhibitors.
Main Results:
- T3 treatment induced a specific set of miRNAs in HeLa cells.
- In silico analysis identified miR-190b as a potential effector of Xbp1-mediated apoptosis.
- In vitro experiments confirmed miR-190b's involvement in Xbp1 splicing.
Conclusions:
- MiR-190b is a key effector in tocotrienol-induced endoplasmic reticulum stress-mediated apoptosis.
- This study elucidates a novel miRNA-mediated mechanism in tocotrienol-induced cell death.
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