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Published on: January 27, 2014
Gαi1 inhibition mechanism of ATP-bound adenylyl cyclase type 5
Daniele Narzi1, Siri C van Keulen1, Ursula Röthlisberger1
1Institut des Sciences et Ingénierie Chimiques, École Polytechnicque Fédérale de Lausanne (EPFL), Lausanne, Switzerland.
Abstract:
Conversion of adenosine triphosphate (ATP) to the second messenger cyclic adenosine monophosphate (cAMP) is an essential reaction mechanism that takes place in eukaryotes, triggering a variety of signal transduction pathways. ATP conversion is catalyzed by the enzyme adenylyl cyclase (AC), which can be regulated by binding inhibitory, Gαi, and stimulatory, Gαs subunits. In the past twenty years, several crystal structures of AC in isolated form and complexed to Gαs subunits have been resolved. Nevertheless, the molecular basis of the inhibition mechanism of AC, induced by Gαi, is still far from being fully understood. Here, classical molecular dynamics simulations of the isolated holo AC protein type 5 and the holo binary complex AC5:Gαi have been analyzed to investigate the conformational impact of Gαi association on ATP-bound AC5. The results show that Gαi appears to inhibit the activity of AC5 by preventing the formation of a reactive ATP conformation.
Insights
The inhibitory Gαi subunit prevents adenylyl cyclase (AC) activity by blocking a reactive ATP conformation. This molecular dynamics study clarifies the inhibition mechanism of AC5:Gαi interactions.
Area of Science:
- Biochemistry
- Molecular Biology
- Structural Biology
Background:
- Cyclic adenosine monophosphate (cAMP) is a crucial second messenger in eukaryotic signaling pathways.
- Adenylyl cyclase (AC) enzymes catalyze the conversion of adenosine triphosphate (ATP) to cAMP.
- AC activity is regulated by stimulatory (Gαs) and inhibitory (Gαi) G protein subunits, but the Gαi inhibition mechanism remains unclear.
Purpose of the Study:
- To investigate the molecular basis of adenylyl cyclase type 5 (AC5) inhibition by the Gαi subunit.
- To understand the conformational changes in ATP-bound AC5 upon Gαi association.
Main Methods:
- Classical molecular dynamics simulations were employed.
- Simulations were performed on isolated holo AC5 and the holo binary complex AC5:Gαi.
Main Results:
- Gαi association induces conformational changes in ATP-bound AC5.
- The inhibitory effect of Gαi is mediated by preventing the formation of a catalytically reactive ATP conformation.
Conclusions:
- Gαi inhibits AC5 by altering its conformation to disfavor ATP activation.
- This study provides molecular insights into the mechanism of AC inhibition by Gαi subunits.
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