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Deep Multiview Learning to Identify Population Structure with Multimodal Imaging.

Yixue Feng1, Kefei Liu2, Mansu Kim2

  • 1School of Engineering and Applied Science, University of Pennsylvania, Philadelphia, USA.

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|March 3, 2021
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Summary
This summary is machine-generated.

This study introduces a deep multiview learning framework using deep generalized canonical correlation analysis (DGCCA) to uncover population structure in Alzheimer's disease cohorts from multimodal imaging data.

Keywords:
Deep learningdeep generalized canonical correlation analysisimage-driven population structuremultimodal imagingmultiview learning

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Area of Science:

  • Neuroimaging
  • Computational Biology
  • Machine Learning

Background:

  • Identifying population structure is crucial for understanding disease heterogeneity.
  • Multimodal imaging data offers rich information but poses analytical challenges.
  • Existing methods may not fully leverage the complex relationships within multimodal data.

Purpose of the Study:

  • To develop an effective deep multiview learning framework for population structure identification.
  • To utilize multimodal imaging data for enhanced insights into Alzheimer's disease cohorts.
  • To improve upon conventional generalized canonical correlation analysis (GCCA) methods.

Main Methods:

  • Proposed a deep generalized canonical correlation analysis (DGCCA) framework.
  • Learned a shared latent representation from non-linearly mapped, maximally correlated components.
  • Applied cluster analysis to the DGCCA-derived feature set for population structure identification.

Main Results:

  • DGCCA captured significantly more variance compared to linear GCCA.
  • Identified a promising population structure within an Alzheimer's disease cohort.
  • DGCCA-based population structure demonstrated a stronger genetic basis than competing methods.

Conclusions:

  • Deep multiview learning with DGCCA is effective for population structure identification using multimodal imaging.
  • The learned shared representation enhances genetic association analyses in disease cohorts.
  • This framework offers a powerful tool for dissecting disease heterogeneity.