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Updated: Nov 12, 2025

Identification of Small Molecule-binding Proteins in a Native Cellular Environment by Live-cell Photoaffinity Labeling
Published on: September 20, 2016
Direct ligand screening against membrane proteins on live cells enabled by DNA-programmed affinity labelling
Yiran Huang1, Yuqing Deng, Jianfu Zhang
1Department of Chemistry and State Key Laboratory of Synthetic Chemistry, The University of Hong Kong, Pokfulam Road, Hong Kong SAR, China, Laboratory for Synthetic Chemistry and Chemical Biology, Health@InnoHK, Innovation and Technology Commission, Hong Kong, SAR, China. xiaoyuli@hku.hk.
Membrane proteins are key drug targets. DNA-programmed affinity labelling (DPAL) enables specific DNA tagging of these proteins on live cells for easier compound screening.
Area of Science:
- Biochemistry
- Molecular Biology
- Chemical Biology
Background:
- Membrane proteins represent a significant class of drug targets.
- Their hydrophobic nature presents substantial challenges for ligand discovery and screening.
- Existing methods for studying membrane proteins often require complex procedures or are not suitable for live-cell applications.
Purpose of the Study:
- To develop a novel method for specifically labeling membrane proteins on live cells.
- To facilitate the screening of chemical compounds against membrane proteins.
- To overcome the challenges associated with the hydrophobic nature of membrane proteins in drug discovery.
Main Methods:
- Development and application of DNA-programmed affinity labelling (DPAL).
- Specific labeling of membrane proteins using a DNA tag.
- Direct screening of chemical compounds against labeled membrane proteins on live cells.
Main Results:
- Demonstration of successful and specific labeling of membrane proteins with DNA tags using DPAL.
- Establishment of a live-cell screening platform for membrane protein ligands.
- Overcoming the hydrophobic barrier in membrane protein drug discovery.
Conclusions:
- DPAL is a powerful technique for specifically labeling membrane proteins.
- This method enables efficient screening of chemical compounds directly on live cells.
- DPAL significantly advances the field of membrane protein drug discovery.
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