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Quickomics: exploring omics data in an intuitive, interactive and informative manner
Benbo Gao1, Jing Zhu1, Soumya Negi1
1Research and Development, Biogen Inc, Cambridge, MA 02142, USA.
Summary:
We developed Quickomics, a feature-rich R Shiny-powered tool to enable biologists to fully explore complex omics statistical analysis results and perform advanced analysis in an easy-to-use interactive interface. It covers a broad range of secondary and tertiary analytical tasks after primary analysis of omics data is completed. Each functional module is equipped with customizable options and generates both interactive and publication-ready plots to uncover biological insights from data. The modular design makes the tool extensible with ease.
Availability And Implementation:
Researchers can experience the functionalities with their own data or demo RNA-Seq and proteomics datasets by using the app hosted at http://quickomics.bxgenomics.com and following the tutorial, https://bit.ly/3rXIyhL. The source code under GPLv3 license is provided at https://github.com/interactivereport/Quickomics for local installation.
Supplementary Information:
Supplementary data are available at Bioinformatics online.
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