Inhibition of YTHDF2 triggers proteotoxic cell death in MYC-driven breast cancer

Jaclyn M Einstein1, Mark Perelis1, Isaac A Chaim1

  • 1Department of Cellular and Molecular Medicine, University of California, San Diego, La Jolla, CA, USA; Stem Cell Program, University of California, San Diego, La Jolla, CA, USA; Institute for Genomic Medicine, University of California, San Diego, La Jolla, CA, USA.

Molecular Cell
|July 3, 2021
PubMed

Insights

Researchers identified RNA-binding proteins (RBPs) that regulate MYC-driven cancers. Disrupting YTHDF2 protein function triggers cancer cell death, offering a potential therapeutic strategy for triple-negative breast cancer (TNBC).

Area of Science:

  • Oncology
  • Molecular Biology
  • Genetics

Background:

  • RNA-binding proteins (RBPs) control gene expression after transcription.
  • Dysregulated RBP-RNA interactions are implicated in cancer development.
  • MYC-driven pathways are crucial in several cancer types.

Purpose of the Study:

  • To investigate the role of RBPs in cancer, particularly in MYC-driven oncogenesis.
  • To identify specific RBPs that could be targeted for cancer therapy.
  • To explore the function of YTHDF2 in triple-negative breast cancer (TNBC).

Main Methods:

  • Pooled CRISPR-Cas9 screening to identify functional RBPs in cancer.
  • eCLIP and m6A sequencing to map RBP-RNA interactions.
  • scRibo-STAMP profiling to analyze the translatome in single cells.

Main Results:

  • Identified 57 RBP candidates involved in MYC-driven pathways.
  • Disruption of YTHDF2 induced apoptosis in TNBC cells and tumors.
  • YTHDF2 targets mRNAs in the MAPK pathway, influencing epithelial-to-mesenchymal transition and translation.
  • YTHDF2 depletion caused specific translatome alterations linked to endoplasmic reticulum stress-induced apoptosis in TNBC.

Conclusions:

  • YTHDF2 plays a critical role in counteracting increased mRNA synthesis in MYC-driven breast cancers.
  • Targeting YTHDF2 represents a potential therapeutic strategy for TNBC.
  • RBPs are promising targets for cancer treatment by modulating gene expression regulation.

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