Related Experiment Video
Updated: Oct 25, 2025

10:05
A Large Lateral Craniotomy Procedure for Mesoscale Wide-field Optical Imaging of Brain Activity
Published on: May 7, 2017
12.5K
Clear optically matched panoramic access channel technique (COMPACT) for large-volume deep brain imaging
Bowen Wei1,2, Chenmao Wang1,2, Zongyue Cheng2,3,4
1School of Electrical and Computer Engineering, Purdue University, West Lafayette, IN, USA.
Nature Methods
|August 6, 2021
Summary
Researchers developed a new technique called COMPACT to image deep brain structures in mice. This method significantly expands the accessible tissue volume for cellular-resolution imaging, aiding the study of neural circuits.
Area of Science:
- Neuroscience
- Biomedical Engineering
- Optical Imaging
Background:
- Understanding neural circuits requires observing neuronal dynamics in vivo.
- Current imaging methods limit cellular-resolution access to superficial brain regions (~1 mm).
- Existing deep brain probes offer limited tissue volume for imaging.
Purpose of the Study:
- To develop a novel technique for large-volume, cellular-resolution imaging of deep brain structures.
- To overcome the limitations of current in vivo imaging technologies for deep brain exploration.
Main Methods:
- Developed the Clear Optically Matched Panoramic Access Channel Technique (COMPACT).
- Designed COMPACT probes with dimensions comparable to gradient-index lenses.
- Utilized COMPACT for multiregional calcium imaging in mice during sleep.
Main Results:
- COMPACT enables a two to three orders of magnitude greater tissue access volume compared to conventional probes.
- Demonstrated successful multiregional calcium imaging in deep brain areas during natural sleep.
- Achieved cellular-resolution imaging across a substantially larger volume of mouse brain tissue.
Conclusions:
- COMPACT significantly enhances the volume of deep brain tissue accessible for in vivo imaging.
- This technique facilitates comprehensive studies of neural circuit mechanisms underlying behavior.
- COMPACT is a valuable tool for diverse deep tissue imaging applications.

