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BHLHE40 promotes macrophage pro-inflammatory gene expression and functions
Atif Zafar1, Hang Pong Ng1, Gun-Dong Kim1
1Department of Pathology, Case Western Reserve University School of Medicine, Cleveland, Ohio, USA.
Summary
The transcription factor BHLHE40 (basic helix-loop-helix family member e40) is crucial for macrophage pro-inflammatory responses. It elevates HIF1α levels, driving inflammatory and glycolytic gene expression essential for innate immunity.
Area of Science:
- Immunology
- Molecular Biology
- Cell Biology
Background:
- Macrophages are key innate immune cells crucial for host defense against pathogens and injury.
- Effective inflammatory responses rely on precise transcriptional regulation of immune and metabolic genes.
- Transcription factors play a vital role in orchestrating these complex cellular processes.
Purpose of the Study:
- To identify novel transcription factors regulating macrophage pro-inflammatory and metabolic gene expression.
- To investigate the role of BHLHE40 (basic helix-loop-helix family member e40) in macrophage activation.
- To elucidate the mechanism by which BHLHE40 influences inflammatory responses.
Main Methods:
- In vivo studies using myeloid-BHLHE40 deficient mice.
- Integrated transcriptomics and gene set enrichment analysis (GSEA).
- Complementary gain- and loss-of-function studies in macrophages.
- Analysis of HIF1α (hypoxia-inducible factor 1-alpha) mRNA and protein expression.
Main Results:
- Myeloid-BHLHE40 deficiency significantly reduced macrophage and neutrophil recruitment to inflammatory sites.
- BHLHE40 deficiency broadly suppressed inflammatory signaling, hypoxia response, and glycolytic gene expression in macrophages.
- BHLHE40 was found to promote LPS-induced HIF1α mRNA and protein expression.
- Overexpression of HIF1α rescued the attenuated pro-inflammatory and glycolytic gene expression in BHLHE40-deficient macrophages.
Conclusions:
- BHLHE40 is a critical transcription factor that promotes pro-inflammatory and glycolytic gene expression in macrophages.
- BHLHE40 functions by elevating HIF1α levels, thereby regulating the macrophage inflammatory response.
- These findings highlight BHLHE40 as a potential therapeutic target for modulating inflammatory diseases.

