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Updated: Oct 19, 2025

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Quantitative PCR-based Assay to Measure Sonic Hedgehog Signaling in Cellular Model of Ciliogenesis
Published on: January 31, 2025
734
Studying Hedgehog Signaling During Mouse Neural Tube Development
Sandii Constable1, Kevin White2, Bandarigoda Nipunika Somatilaka2,3
1Department of Cell Biology, University of Texas Southwestern Medical Center, Dallas, TX, USA. Sandra.Constable@utsouthwestern.edu.
Methods in Molecular Biology (Clifton, N.J.)
|September 25, 2021
Summary
Hedgehog (Hh) signaling dictates ventral neural progenitor identity. Aberrant signaling is revealed by altered staining patterns, which this protocol helps identify using transcription factor and ciliary/centrosomal markers.
Area of Science:
- Developmental biology
- Neuroscience
- Cell biology
Background:
- Ventral neural progenitor identity in the neural tube is primarily regulated by Hedgehog (Hh) signaling pathways.
- Distinct staining patterns in neural progenitors serve as crucial indicators of normal or aberrant Hh signaling activity.
Purpose of the Study:
- To outline a fundamental protocol for staining neural progenitor populations within the neural tube.
- To detail methods for assessing progenitor identity based on transcription factor expression.
- To provide an overview of ciliary and centrosomal staining techniques relevant to neural tube studies.
Main Methods:
- Immunohistochemical staining for specific transcription factors to identify progenitor populations.
- Staining techniques targeting ciliary and centrosomal components within neural tube cells.
- Analysis of staining patterns to infer Hedgehog signaling status.
Main Results:
- Established a protocol for visualizing and quantifying distinct neural progenitor subtypes.
- Demonstrated the utility of transcription factor expression patterns in identifying cell identities.
- Characterized ciliary and centrosomal staining as indicators of Hh pathway modulation.
Conclusions:
- The described protocol enables precise identification of ventral neural progenitors.
- Transcription factor and ciliary/centrosomal staining are valuable tools for studying Hh signaling in neural development.
- This methodology aids in understanding neural tube development and identifying developmental abnormalities.
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