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Published on: February 10, 2023
R-loops trigger the release of cytoplasmic ssDNAs leading to chronic inflammation upon DNA damage
Ourania Chatzidoukaki1,2, Kalliopi Stratigi1, Evi Goulielmaki1
1Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas, GR70013 Heraklion, Crete, Greece.
Abstract:
How DNA damage leads to chronic inflammation and tissue degeneration with aging remains to be fully resolved. Here, we show that DNA damage leads to cellular senescence, fibrosis, loss-of-tissue architecture, and chronic pancreatitis in mice with an inborn defect in the excision repair cross complementation group 1 (Ercc1) gene. We find that DNA damage-driven R-loops causally contribute to the active release and buildup of single-stranded DNAs (ssDNAs) in the cytoplasm of cells triggering a viral-like immune response in progeroid and naturally aged pancreata. To reduce the proinflammatory load, we developed an extracellular vesicle (EV)-based strategy to deliver recombinant S1 or ribonuclease H nucleases in inflamed Ercc1 pancreatic cells. Treatment of Ercc1 animals with the EV-delivered nuclease cargo eliminates DNA damage-induced R-loops and cytoplasmic ssDNAs alleviating chronic inflammation. Thus, DNA damage-driven ssDNAs causally contribute to tissue degeneration, Ercc1 paving the way for novel rationalized intervention strategies against age-related chronic inflammation.
Insights
DNA damage causes chronic inflammation and tissue aging. Extracellular vesicles delivering nucleases cleared DNA damage, reducing inflammation and suggesting new therapies for age-related diseases.
Area of Science:
- Molecular Biology
- Immunology
- Geroscience
Background:
- DNA damage accumulation is linked to aging and chronic inflammation.
- The precise mechanisms connecting DNA damage to tissue degeneration are not fully understood.
Purpose of the Study:
- To investigate the role of DNA damage in chronic pancreatitis and tissue degeneration.
- To explore therapeutic strategies for mitigating DNA damage-induced inflammation.
Main Methods:
- Utilized Ercc1-deficient mice exhibiting DNA damage.
- Investigated DNA damage-induced R-loops and cytoplasmic ssDNAs.
- Developed an extracellular vesicle (EV)-based delivery system for nucleases.
Main Results:
- DNA damage in Ercc1-deficient mice led to cellular senescence, fibrosis, and chronic pancreatitis.
- DNA damage-driven R-loops caused cytoplasmic ssDNA buildup, triggering an immune response.
- EV-delivered nucleases successfully eliminated R-loops and cytoplasmic ssDNAs, reducing inflammation.
Conclusions:
- DNA damage-induced ssDNAs are a causal factor in age-related tissue degeneration and chronic inflammation.
- EV-mediated nuclease delivery offers a promising therapeutic approach for age-related inflammatory conditions.
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