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Schemas01:42

Schemas

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A schema is a mental construct consisting of a cluster or collection of related concepts (Bartlett, 1932). There are many different types of schemata, and they all have one thing in common: schemata are a method of organizing information that allows the brain to work more efficiently. When a schema is activated, the brain makes immediate assumptions about the person or object being observed.
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In general, a schema is a mental construct consisting of a cluster or collection of related concepts (Bartlett, 1932). There are many different types of schemata, and they all have one thing in common: schemata are a method of organizing information that allows the brain to work more efficiently. When a schema is activated, the brain makes immediate assumptions about the person or object being observed.
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Schemata01:17

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A schema is a mental construct that organizes related concepts, allowing the brain to process information efficiently. Upon activation, schemata facilitate assumptions about people or objects.
Two types of schemata are:
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Methods of Documentation I: Source-Oriented Records01:18

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Source-oriented records, or SOR, are medical record-keeping organized by the data source. The SOR system was first developed in the mid-1900s to organize the growing patient data in hospitals and other healthcare facilities.
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The resolution of a mass spectrometer depends on the efficiency of separating ions with different ion masses. The mass of an atom is approximated to the sum of the masses of protons and neutrons inside, considering the masses of protons and neutrons as equal. However, the masses of the proton (1.6726 × 10−24 g) and neutron (1.6749 × 10−24 g) are not truly equal. There is a minor error in the expression of atomic masses relative to the simplest atom of hydrogen. For...
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The genome refers to all of the genetic material in an organism. It can range from a few million base pairs in microbial cells to several billion base pairs in many eukaryotic organisms. Genome assembly refers to the process of taking the DNA sequencing data and putting it all back together in a correct order to create a close representation of the original genome. This is followed by the identification of functional elements on the newly assembled genome, a process called genome annotation.
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Related Experiment Video

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gP2S, an Information Management System for CryoEM Experiments
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Adamant: a JSON schema-based metadata editor for research data management workflows.

Ihda Chaerony Siffa1, Jan Schäfer1, Markus M Becker1

  • 1Leibniz Institute for Plasma Science and Technology (INP), Greifswald, Felix-Hausdorff-Straße 2, 17489, Germany.

F1000Research
|August 4, 2022
PubMed
Summary
This summary is machine-generated.

Adamant is a web tool that streamlines research data management (RDM) from experiment conception. It supports FAIR data principles through user-friendly metadata collection and integration with existing RDM tools.

Keywords:
FAIR PrinciplesJSON SchemaResearch Data Management

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Area of Science:

  • Computer Science
  • Information Science
  • Scientific Research

Background:

  • Effective research data management (RDM) is crucial for scientific integrity and reproducibility.
  • Achieving Findable, Accessible, Interoperable, and Reusable (FAIR) data requires systematic metadata collection.
  • Small laboratories often face challenges integrating robust RDM practices into their workflows.

Purpose of the Study:

  • To introduce Adamant, a web tool designed for systematic and early-stage research metadata collection.
  • To facilitate a continuous, consistent, and transparent RDM process.
  • To simplify the creation of metadata schemas and support adherence to data standards.

Main Methods:

  • Utilizes JavaScript Object Notation (JSON) schema to generate interactive web forms for metadata collection.
  • Provides a user-friendly interface (UI) accessible to users with limited programming experience.
  • Offers a programming interface for integration with other RDM software, such as electronic lab notebooks and repositories.

Main Results:

  • Adamant enables on-demand metadata schema creation and collection according to established or new standards.
  • The tool simplifies the integration of various RDM methods and software into daily research activities.
  • Its intuitive UI design ensures accessibility for researchers regardless of their technical expertise.

Conclusions:

  • Adamant supports good scientific practice by ensuring a transparent and consistent RDM process.
  • The tool promotes the creation of FAIR research data.
  • Adamant is particularly beneficial for small independent laboratories seeking to enhance their RDM capabilities.