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Related Concept Videos

Ligand Binding Sites02:40

Ligand Binding Sites

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Proteins are dynamic macromolecules that carry out a wide variety of essential processes; however, the activities of most proteins depend on their interactions with other molecules or ions, known as ligands.
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Allosteric proteins have more than one ligand binding site; the binding of a ligand to any of these sites influences the binding of ligands to the other sites. When a protein is allosteric, its binding sites are called coupled or linked.  In the case of enzymes, the site that binds to the substrate is known as the active site and the other site is known as the regulatory site. When a ligand binds to the regulatory site, this leads to conformational changes in the protein that can influence...
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Conserved Binding Sites01:49

Conserved Binding Sites

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Many proteins’ biological role depends on their interactions with their ligands, small molecules that bind to specific locations on the protein known as ligand-binding sites. Ligand-binding sites are often conserved among homologous proteins as these sites are critical for protein function.
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Cells respond to many types of information, often through receptor proteins positioned on the membrane. They respond to chemical signals, such as hormones, neurotransmitters, and other signaling molecules, initiating a series of molecular reactions to produce an appropriate response. This is called signal transduction. Cells also coordinate different responses elicited by the same signaling molecule via mediators, allowing molecular cross-talk.
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Updated: Sep 2, 2025

Nano-Differential Scanning Fluorimetry for Screening in Fragment-based Lead Discovery
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DNA Framework-Programmed Ligand Positioning to Modulate the Targeting Performance.

Mengqiu Gao1, Zhihao Han1, Li Zhou1

  • 1Department of Biomedical Engineering, China Pharmaceutical University, Nanjing 210009, China.

ACS Applied Materials & Interfaces
|August 3, 2022
PubMed
Summary
This summary is machine-generated.

Optimizing nanomedicine targeting is crucial. DNA tetrahedrons precisely control ligand placement, revealing that ligand spacing, not just quantity, significantly enhances tumor cell targeting and cytostatic activity.

Keywords:
DNA tetrahedronligand distanceligand positionspatial modificationtargeting efficiency

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Area of Science:

  • Biomedical Engineering
  • Nanotechnology
  • Molecular Biology

Background:

  • Effective nanomedicine targeting remains a challenge, with clinical trials showing insufficient drug concentration at target sites.
  • The influence of ligand-modification patterns on nanovector targeting efficiency is not well understood.
  • DNA nanostructures offer precise control over ligand presentation for targeted drug delivery.

Purpose of the Study:

  • To investigate the impact of ligand-modification patterns, specifically ligand valence and spacing, on nanovector targeting.
  • To establish nanovectors with homogeneous and precisely controlled ligand-modification patterns using DNA tetrahedrons.
  • To evaluate the in vitro and in vivo targeting performance and therapeutic efficacy of these engineered nanovectors.

Main Methods:

  • Utilized DNA tetrahedrons as scaffolds for site-specific modification with targeting ligands.
  • Synthesized nanovectors with varying ligand valences and controlled nanoscale distances between ligands.
  • Conducted in vitro and in vivo studies to assess nanovector targeting efficiency and anti-tumor activity.

Main Results:

  • Increasing ligand quantity alone provided limited improvement in targeting efficiency.
  • The spatial distance between ligands played a more critical role in enhancing nanovector targeting.
  • Nanovectors with the largest ligand distance (approx. 156.55 Å) demonstrated optimal targeting and significant cytostatic effects on tumor cells.

Conclusions:

  • Ligand-modification patterns, particularly inter-ligand spacing, are critical determinants of nanomedicine targeting efficacy.
  • DNA nanostructures enable precise engineering of nanovectors for improved therapeutic outcomes.
  • This study provides valuable guidance for optimizing nanomedicine design and development for enhanced tumor targeting.