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Reverse Genetics to Engineer Positive-Sense RNA Virus Variants
Published on: June 9, 2022
[cytomegalovirus; resistance; antiviral therapy; UL97 kinase; polymerase]
Sophie Alain1, Sébastien Cotin1, Sébastien Hantz1
1Service de bactériologievirologie-hygiène, CHU de Limoges, Centre national de référence des cytomégalovirus, EA3175, Faculté de médecine de Limoges.
Abstract:
Antiviral resistance of cytomegalovirus strains is a growing problem in the transplant setting as it can concern 5% of patients with CMV replication. It is a consequence of the intensive and prolonged use of the three clinically approved inhibitors of the viral polymerase UL54, ganciclovir cidofovir and foscarnet. Resistance to ganciclovir can result from either mutations of the UL97 kinase, dispensable for its activation, which may appear within one month of therapy, or later from mutations in the UL54 viral polymerase, that can confer resistance to all antivirals. Screening for resistance is based on genotyping from clinical sample or isolates, and has to be associated whenever isolates are obtained to phenotype to evaluate the fitness of the virus and to test new drugs in the pipeline. Plasmatic dosage of the molecules, available for ganciclovir, reduction of immunosuppression, and if necessary modification of the antiviral regimen guided by genotype and/or phenotype are associated to control CMV infection in case of resistance.
Insights
Antiviral resistance in cytomegalovirus (CMV) is a significant issue for transplant patients. Genotyping and phenotyping are crucial for managing CMV infection when resistance emerges.
Area of Science:
- Virology
- Infectious Diseases
- Transplantation Immunology
Context:
- Antiviral resistance in cytomegalovirus (CMV) is a growing clinical challenge, particularly in transplant recipients.
- This resistance stems from the extensive use of approved antiviral drugs targeting the viral polymerase UL54, including ganciclovir, cidofovir, and foscarnet.
- Resistance can arise from mutations in the UL97 kinase or the UL54 viral polymerase, impacting treatment efficacy.
Purpose:
- To highlight the increasing problem of antiviral resistance in cytomegalovirus (CMV) within the transplant population.
- To explain the mechanisms of resistance, including mutations in UL97 kinase and UL54 viral polymerase.
- To emphasize the importance of resistance screening through genotyping and phenotyping.
Summary:
- Cytomegalovirus (CMV) antiviral resistance affects up to 5% of transplant patients due to prolonged use of ganciclovir, cidofovir, and foscarnet.
- Mutations in UL97 kinase lead to early ganciclovir resistance, while UL54 polymerase mutations confer broader resistance to antivirals.
- Resistance screening involves genotyping clinical samples and phenotyping viral isolates to assess viral fitness and guide therapeutic decisions.
Impact:
- Effective management of CMV infection in transplant patients requires integrated strategies including resistance screening.
- Genotypic and phenotypic data are essential for tailoring antiviral regimens and optimizing patient outcomes.
- Monitoring drug resistance is critical for developing new antiviral therapies and improving long-term survival in immunocompromised individuals.
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