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Updated: Aug 20, 2025

A High-Throughput Luciferase Assay to Evaluate Proteolysis of the Single-Turnover Protease PCSK9
Published on: August 28, 2018
A novel angiogenic effect of PCSK9- regulated genes
Xiaopeng Zhan1, Li Jiang1, Lufeng Wang2
1Department of Cardiovascular Medicine, East Hospital, Tongji University School of Medicine, Shanghai.
Background:
Since the discovery of the Proprotein Convertase Subtilisin/Kexin Type 9(PCSK9) gene has been involved in regulating low-density lipoprotein metabolism and cardiovascular disease (CVD), many therapeutic strategies directly targeting PCSK9 have been introduced. PCSK9 gain of function (GoF) mutations are associated with autosomal dominant hypercholesterolemia (ADH) and premature atherosclerosis. In contrast, PCSK9 loss of function (LOF) mutations have cardioprotective effects and can lead to familial hypo cholesterol in some instances. However, its potential impacts beyond the typical effects on lipid metabolism have not been elucidated. Therefore the study aimed to identify and verify PCSK9's possible effects beyond its traditional role in lipid metabolism.
Methods:
The S127R is a PCSK9 gain of function mutation. Firstly, We used the data of the gene expression Omnibus(GEO) database to identify the differentially expressed genes between S127R mutation carriers and ordinary people. Secondly, the identification and analysis of significant genes were performed with various bioinformatics programs. Thirdly, to verify the possible effect and the potential pathways of PCSK9 on angiogenesis, we constructed PCSK9 low and high expression models by transfecting PCSK9-siRNA (small interfering RNA) and PCSK9-plasmid complex into human umbilical vein endothelial cells (HUVECs), respectively. Furthermore, Wound-Healing Assay and Capillary tube formation assay were applied to measure the effect of PCSK9 on angiogenesis. Fourthly, the expression level of VEGFR2 and the significant genes between PCSK9 low and high expression models were verified by quantitative real-time PCR. All data were analysed by GraphPad Prism 8 software.
Results:
88 DEGs were identified, including 45 up-regulated and 43 down-regulated DEGs. Furthermore, we identified the six genes (MMP9, CASP3, EGR1, NGFR, LEFTY1 and NODAL) as significantly different genes between PCSK9-S127R and Control hiPSC. Further, we found that these significant difference genes were mainly associated with angiogenesis after enrichment analysis. To verify the possible effect of PCSK9 on angiogenesis, we constructed low and high-expression PCSK9 models by transfecting siRNA and PCSK9-plasmid complex into human umbilical vein endothelial cells (HUVECs), respectively. The tubule formation test and Wound healing assays showed that overexpression of PCSK9 had an inhibitory effect on angiogenesis, which could be reversed by decreasing the expression of PCSK9. Moreover, bioinformatics analysis indicated that the six hub genes (MMP9, CASP3, EGR1, NGFR, LEFTY1 and NODAL) might play a vital role in the biological function of PCSK9 in angiogenesis. Real-time quantitative PCR was applied to clarify the expression profiles of these critical genes in overexpression/knockdown PCSK9. Finally, the expression levels of MMP9, Caspase3, LEFTY1, and NODAL were suppressed by overexpression of PCSK9 and could be alleviated by PCSK9 knockdown. Otherwise, EGR1 had the opposite expression trend, and there was no specific trend of NGFR after repeated experiments.
Conclusion:
PCSK9 might play an essential role in angiogenesis, unlike its typical role in lipid metabolism, and MMP9, Caspase3, LEFTY1, NODAL, and EGR1 may be involved in the regulation of angiogenesis as critical genes.
Insights
Proprotein Convertase Subtilisin/Kexin Type 9 (PCSK9) influences angiogenesis, impacting cardiovascular disease beyond lipid metabolism. Key genes like MMP9 and EGR1 are involved in PCSK9
Area of Science:
- Molecular Biology
- Genetics
- Cardiovascular Research
Background:
- Proprotein Convertase Subtilisin/Kexin Type 9 (PCSK9) is crucial for low-density lipoprotein metabolism and cardiovascular disease (CVD).
- Gain-of-function (GoF) PCSK9 mutations are linked to hypercholesterolemia and atherosclerosis.
- The non-lipid-related functions of PCSK9 remain largely uncharacterized.
Purpose of the Study:
- To investigate the potential roles of PCSK9 beyond its established function in lipid metabolism.
- To identify and verify PCSK9's effects on angiogenesis.
Main Methods:
- Utilized Gene Expression Omnibus (GEO) data to identify differentially expressed genes (DEGs) in PCSK9-S127R mutation carriers.
- Constructed PCSK9 low and high expression models in human umbilical vein endothelial cells (HUVECs) using siRNA and plasmid transfection.
- Assessed angiogenesis using Wound-Healing and Capillary tube formation assays; verified gene expression via quantitative real-time PCR.
Main Results:
- Identified 88 DEGs, with six key genes (MMP9, CASP3, EGR1, NGFR, LEFTY1, NODAL) significantly associated with angiogenesis.
- Overexpression of PCSK9 inhibited angiogenesis in HUVECs, an effect reversed by PCSK9 knockdown.
- PCSK9 modulated the expression of MMP9, Caspase3, LEFTY1, NODAL, and EGR1, suggesting their involvement in PCSK9-mediated angiogenesis.
Conclusions:
- PCSK9 plays a significant role in regulating angiogenesis, independent of its lipid-modulating functions.
- MMP9, Caspase3, LEFTY1, NODAL, and EGR1 are identified as critical genes involved in PCSK9's regulation of angiogenesis.
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