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Updated: Aug 20, 2025

Rapid Antimicrobial Susceptibility Testing by Stimulated Raman Scattering Imaging of Deuterium Incorporation in a Single Bacterium
Published on: February 14, 2022
Advances in antimicrobial resistance testing
Chi Zhang1, Liying Sun1, Di Wang1
1NHC Key Laboratory of Systems Biology of Pathogens, Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, P. R. China; Key Laboratory of Respiratory Disease Pathogenomics, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, P. R. China.
Abstract:
Antimicrobial resistance (AMR), especially bacterial AMR, poses a global threat to public health and has become a huge obstacle to the effective control of related infectious diseases. Following the golden age of antimicrobials discovery between the 1940s and 1960s, antimicrobial abuse resulted in the rapid emergence of AMR. Nowadays, the problem of AMR has become increasingly serious, and some bacteria have reached the brink of no suitable antimicrobials available. Rapid detection of AMR and level quantification are the prerequisites to control the spread of AMR. Although time-consuming, traditional phenotype-based methods are still the primary methods used in clinical laboratories and are regarded as the gold standard for AMR identification. To offset the limitation of the long turnaround time of phenotype-based methods, molecular detection methods such as polymerase chain reaction (PCR), isothermal amplification, high-throughput sequencing, gene microarray, and mass spectrometry have begun to be widely used and served as important complements to phenotype-based methods. This chapter will describe the advances in the above technologies applied in AMR testing.
Insights
Antimicrobial resistance (AMR) is a growing global health threat. This chapter reviews advanced molecular detection methods that complement traditional tests for faster AMR identification and control.
Area of Science:
- Microbiology
- Public Health
- Molecular Biology
Background:
- Antimicrobial resistance (AMR), particularly bacterial AMR, presents a significant global public health challenge.
- The widespread use and abuse of antimicrobials have accelerated the emergence and spread of AMR.
- The increasing severity of AMR means some bacterial infections are becoming untreatable due to a lack of effective antimicrobial options.
Purpose of the Study:
- To highlight the critical need for rapid detection and quantification of AMR.
- To review and describe advancements in molecular technologies for AMR testing.
- To provide an overview of methods complementing traditional antimicrobial susceptibility testing.
Main Methods:
- Review of molecular detection technologies for AMR.
- Discussion of polymerase chain reaction (PCR) and isothermal amplification.
- Overview of high-throughput sequencing, gene microarray, and mass spectrometry applications in AMR detection.
Main Results:
- Traditional phenotype-based methods, while gold standard, are time-consuming.
- Molecular methods offer faster alternatives to traditional AMR detection.
- Various molecular techniques are increasingly utilized as complements to established methods.
Conclusions:
- Rapid AMR detection is essential for controlling infectious diseases.
- Molecular detection technologies represent significant advances in AMR testing.
- These advanced methods are crucial for addressing the global AMR crisis.
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