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Overview Of Cell Separation And Isolation01:20

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Cell separation was first achieved in 1964 by S. H. Seal, who separated large tumor cells from the smaller blood cells using filtration. Two years later, Pohl and Hawk performed experiments on how cells respond differently to a nonuniform electric field based on the cell type. Such observations were the inception of cell separation methods, which allow isolating a single cell type from a heterogeneous sample.
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Ensuring Quality Cell Input for Single Cell Sequencing Experiments by Viability and Singlet Enrichment Using Cell

Malte Paulsen1

  • 1DanStem Institute, University Copenhagen, Copenhagen, Denmark. malte.paulsen@sund.ku.dk.

Methods in Molecular Biology (Clifton, N.J.)
|December 10, 2022
PubMed
Summary
This summary is machine-generated.

Ensuring high-quality input is crucial for sensitive single-cell sequencing. This study presents two precise methods to prepare viable single cells from tissues, minimizing variability for accurate transcriptomics.

Keywords:
ApoptosisCell sortingCell viabilityEnrichmentMetabolic labelingSingle cell RNA sequencing

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Area of Science:

  • Molecular Biology
  • Genomics
  • Biotechnology

Background:

  • Single-cell sequencing is highly sensitive to input material.
  • Variability in single-cell RNA can compromise results.
  • Tissue processing is often required for single-cell transcriptomics.

Purpose of the Study:

  • To provide protocols for preparing viable single cells.
  • To reduce extrinsic variability in single-cell assays.
  • To ensure high-quality input for single-cell sequencing.

Main Methods:

  • Development of two distinct tissue digestion protocols.
  • Focus on methods ensuring cell viability.
  • Optimization for single-cell transcriptomics workflows.

Main Results:

  • Protocols yield homogenous single-cell suspensions.
  • Methods effectively preserve cell viability.
  • Reduced variability in downstream single-cell assays.

Conclusions:

  • High-quality single-cell input is essential for accurate transcriptomics.
  • The presented methods provide reliable cell preparation.
  • These protocols enhance the robustness of single-cell sequencing studies.