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Updated: Aug 10, 2025

Nanomechanics of Drug-target Interactions and Antibacterial Resistance Detection
Published on: October 25, 2013
Structure of VanS from vancomycin-resistant enterococci: A sensor kinase with weak ATP binding
Kimberly C Grasty1, Claudia Guzik1, Elizabeth J D'Lauro1
1Department of Biochemistry and Molecular Biology, Drexel University College of Medicine, Philadelphia, Pennsylvania, USA.
Structural insights into VanS proteins reveal weak ATP binding, suggesting a regulatory mechanism for vancomycin resistance in enterococci. This finding advances understanding of two-component systems in antibiotic resistance.
Area of Science:
- Microbiology
- Structural Biology
- Biochemistry
Background:
- The VanRS two-component system controls vancomycin resistance in enterococci.
- VanS, a sensor histidine kinase, initiates resistance gene expression upon vancomycin detection.
- Structural data for VanS proteins were previously unavailable, limiting mechanistic understanding.
Purpose of the Study:
- To elucidate the structural basis of VanS protein function.
- To investigate the interaction of VanS with ATP.
- To understand the regulation of vancomycin resistance at a molecular level.
Main Methods:
- X-ray crystallography was used to determine the structures of the catalytic and ATP-binding (CA) domains of VanS proteins from vancomycin-resistant enterococci types A and C.
- Binding affinities for ATP were measured using biochemical assays.
Main Results:
- The crystal structures revealed that both VanS CA domains adopt the canonical Bergerat fold.
- Attempts to crystallize nucleotide-bound forms were unsuccessful.
- Both VanS CA domains exhibited low affinities for ATP (KD in the millimolar range), comparable to intracellular ATP levels.
Conclusions:
- The weak ATP binding affinity of VanS CA domains may represent a regulatory mechanism for controlling the vancomycin resistance phenotype.
- These structural and biochemical findings provide a foundation for understanding VanRS system regulation.
- Further research can explore how this weak binding impacts resistance gene expression.
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