Related Experiment Video
Updated: Aug 6, 2025

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
Published on: April 4, 2018
Great expectations: patients' preferences for clinically significant results from genomic sequencing
Salma Shickh1,2, Agnes Sebastian1,2, Marc Clausen2
1Institute of Health Policy, Management and Evaluation, University of Toronto, Toronto, ON, Canada.
Cancer patients desire a wide range of genomic sequencing secondary findings (SF), including non-actionable results. Patient preferences for SF should inform future clinical guidelines beyond just medical actionability.
Area of Science:
- Genomic Medicine
- Clinical Genetics
- Patient-Reported Outcomes
Background:
- Genomic sequencing (GS) generates secondary findings (SF) beyond the primary diagnostic purpose.
- Professional guidelines often recommend returning only medically actionable SF.
- Understanding patient preferences for SF is crucial for ethical and personalized genetic testing.
Purpose of the Study:
- To describe patient preferences for various categories of SF from GS.
- To identify factors influencing these preferences among adult cancer patients.
- To compare patient preferences with existing professional guidelines on SF return.
Main Methods:
- Assessed patient preferences for five SF categories using the Genomics ADvISER decision aid.
- Collected data from 133 adult cancer patients with diverse ancestries.
- Analyzed preferences using descriptive statistics and logistic regression for preference drivers.
Main Results:
- The majority of participants (97%) chose to receive medically actionable SF.
- Significant interest was shown in non-actionable SF: polygenic risks (74%), carrier status (75%), rare diseases (59%), and early-onset neurological diseases (53%).
- Older participants preferred early-onset neurological disease results; lower decisional conflict correlated with selecting all SF categories.
Conclusions:
- A notable gap exists between cancer patient preferences for SF and current professional guidelines.
- Patient preferences encompass a broader range of SF than typically recommended.
- Future guidelines for returning SF should integrate patient values and preferences alongside clinical evidence.
More Related Videos
13:24Integration of Wet and Dry Bench Processes Optimizes Targeted Next-generation Sequencing of Low-quality and Low-quantity Tumor Biopsies
Published on: April 11, 2016
11:15Next Generation Sequencing for the Detection of Actionable Mutations in Solid and Liquid Tumors
Published on: September 20, 2016