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Machine learning for optical chemical multi-analyte imaging : Why we should dare and why it's not without risks.
Silvia E Zieger1, Klaus Koren2
1Aarhus University Centre for Water Technology (WATEC), Department of Biology, Section for Microbiology, Aarhus University, Ny Munkegade 114, 8000, Aarhus C, Denmark.
Analytical and Bioanalytical Chemistry
|April 18, 2023
Summary
Machine learning enables simultaneous 2D imaging of pH and dissolved oxygen (O2) using optical chemical sensors. This approach overcomes complex signal correlations for accurate multi-analyte sensing in biological environments.
Area of Science:
- Biomedical Engineering
- Analytical Chemistry
- Machine Learning Applications
Background:
- Simultaneous sensing of interrelated metabolic analytes like pH and dissolved oxygen (O2) is crucial for understanding complex biological systems.
- Current optical sensing methods face challenges in directly correlating sensor signals to analyte concentrations due to interfering effects.
- Machine learning (ML) offers a promising solution for resolving complex, multidimensional correlations in optical sensing data.
Purpose of the Study:
- To apply machine learning models to fluorescence-based optical chemical sensors for simultaneous multi-analyte imaging in 2D.
- To demonstrate a proof-of-concept for simultaneous imaging of pH and dissolved O2.
- To explore the potential of ML in overcoming challenges in optical chemical sensing.
Main Methods:
- Utilized a fluorescence-based optical chemical sensor array for data acquisition.
- Employed a hyperspectral camera for high-resolution image capture.
- Developed and applied a multi-layered machine learning model, specifically XGBoost, for data analysis and analyte prediction.
Main Results:
- Achieved accurate simultaneous imaging of pH and dissolved O2.
- The ML model predicted dissolved O2 with a mean absolute error < 4.50×10⁻² and pH < 1.96×10⁻¹.
- Reported root mean square errors < 2.12×10⁻¹ for O2 and < 4.42×10⁻¹ for pH.
Conclusions:
- Machine learning, particularly XGBoost, effectively facilitates simultaneous 2D imaging of multiple analytes using optical chemical sensors.
- This approach addresses limitations in correlating sensor signals to analyte concentrations in complex biological samples.
- Highlights the potential of ML for advanced multi-analyte optical sensing while cautioning against potential data biases.

