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Assessing Somatic Hypermutation in Ramos B Cells after Overexpression or Knockdown of Specific Genes
Published on: November 1, 2011
Necessity of HuR/ELAVL1 for the activation-induced cytidine deaminase-dependent decrease in topoisomerase 1 in
Wajid Amin1, Shoki Nishio1, Tasuku Honjo1
1Department of Immunology and Genomic Medicine, Center for Cancer Immunotherapy and Immunobiology, Graduate School of Medicine, Kyoto University, 606-8501, Kyoto, Japan.
The RNA-binding protein HuR (ELAVL1) is essential for antibody diversification. HuR regulates DNA cleavage by repressing Topoisomerase 1 (Top1) synthesis, crucial for class switch recombination and somatic hypermutation.
Area of Science:
- Immunology
- Molecular Biology
- Genetics
Background:
- Activation-induced cytidine deaminase (AID) initiates antibody gene diversification via DNA cleavage.
- Efficient DNA cleavage requires an AID-dependent decrease in Topoisomerase 1 (Top1) levels, but the mechanism is unclear.
- HuR (ELAVL1) is an RNA-binding protein interacting with AU-rich elements.
Purpose of the Study:
- To elucidate the molecular mechanism by which HuR influences AID-dependent DNA cleavage.
- To investigate HuR's role in antibody gene diversification processes like class switch recombination (CSR) and somatic hypermutation (SHM).
Main Methods:
- Utilized HuR-knockout (KO) CH12 murine B lymphoma cells.
- Assessed CSR and SHM efficiencies, AID-dependent DNA cleavage levels, cell cycle, and Myc expression.
- Investigated the effect of reactive oxygen species (ROS) scavengers.
- Analyzed HuR binding to Top1 mRNA and Top1 protein synthesis.
- Performed Top1 knockdown rescue experiments in HuR-KO cells.
Main Results:
- HuR-KO CH12 cells exhibited reduced CSR and SHM efficiencies due to impaired AID-dependent DNA cleavage.
- HuR-KO cells showed normal cell cycles and Myc expression; ROS scavengers did not rescue CSR.
- HuR binds to Top1 mRNA, and its absence abolishes AID-dependent repression of Top1 protein synthesis.
- Top1 knockdown rescued CSR to IgG3 in HuR-KO cells, confirming Top1 accumulation as the cause of inefficiency.
Conclusions:
- HuR is critical for initiating antibody diversification and acquired immunity.
- HuR regulates AID-dependent DNA cleavage by repressing Top1 protein synthesis.
- The mechanism involves HuR's control over Top1 levels, impacting DNA cleavage efficiency in CSR and SHM.
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