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Updated: Jul 29, 2025

Author Spotlight: A Pipeline to Analyze Lineage-Specific Mutant Embryos at Single-Cell Resolution
Published on: June 14, 2024
Time-aligned hourglass gastrulation models in rabbit and mouse.
Yoav Mayshar1, Ofir Raz2, Saifeng Cheng1
1Department of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel.
Mammalian development shows convergence in body plan formation, as seen in rabbit and mouse embryos. This study reveals conserved gene expression but divergent germ cell development, offering insights into evolutionary developmental biology.
Area of Science:
- Developmental Biology
- Evolutionary Biology
- Genomics
Background:
- The hourglass model proposes developmental convergence within phyla, but its molecular basis in mammals is unclear.
- Understanding mammalian developmental mechanisms is crucial for evolutionary insights.
Purpose of the Study:
- To investigate the molecular mechanisms of developmental convergence in mammals using a comparative approach.
- To analyze single-cell differentiation trajectories during mammalian gastrulation.
Main Methods:
- Comparative analysis of rabbit and mouse embryos at single-cell resolution.
- Modeling gastrulation dynamics from E6.0 to E8.5.
- Utilizing a framework for time-resolved single-cell differentiation-flows analysis.
Main Results:
- Convergence of cell-state compositions observed at embryonic day 7.5 (E7.5) in both species.
- Quantitatively conserved expression of 76 key transcription factors.
- Divergence noted in primordial germ cell programs and lineage specification timing, with rabbits not activating mesoderm genes in germ cells.
Conclusions:
- Mammalian gastrulation exhibits conserved core developmental programs despite species-specific variations.
- Comparative single-cell analysis provides a powerful tool for studying evolutionary developmental dynamics.
- Findings contribute to understanding the evolution of body plan development across mammals.
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