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Satellite imagery for high-throughput phenotyping in breeding plots
Francisco Pinto1, Mainassara Zaman-Allah2, Matthew Reynolds1
1Global Wheat Program, International Maize and Wheat Improvement Center (CIMMYT), Texcoco, Mexico.
Frontiers in Plant Science
|June 1, 2023
Summary
High-resolution satellite imagery, specifically SkySat, shows promise for cost-effective, high-throughput phenotyping in crop breeding. This technology can reliably track plant growth and genetic differences, aiding crop improvement efforts.
Area of Science:
- Agricultural Science
- Remote Sensing
- Plant Breeding
Background:
- Crop breeding advancements are hindered by costly and complex phenotyping methods.
- Satellite imagery offers a scalable solution for remote crop monitoring, but low resolution has been a limitation.
- New high-resolution satellites present an opportunity to overcome previous spatial resolution constraints.
Purpose of the Study:
- To evaluate the utility of time-series SkySat imagery for phenotyping wheat and maize breeding plots.
- To assess the reliability of NDVI estimation from high-resolution satellite data.
- To determine the capacity of this approach for detecting seasonal changes and genotypic variations in breeding trials.
Main Methods:
- Utilized time-series multispectral images from the SkySat constellation (0.5m resolution).
- Estimated Normalized Difference Vegetation Index (NDVI) for wheat and maize plots of varying sizes and spacing.
- Evaluated NDVI reliability, seasonal changes, and genotypic difference detection.
Main Results:
- SkySat imagery reliably estimated NDVI in wheat and maize breeding plots.
- The approach successfully detected seasonal vegetation changes.
- Genotypic differences within breeding plots were discernible using this method.
Conclusions:
- High-resolution satellite phenotyping using SkySat is a viable tool for crop breeding.
- This technology can enhance high-throughput phenotyping, reduce costs, and standardize protocols.
- Future applications include broader implementation in breeding programs for faster genetic gains and improved crop resilience.
Keywords:
breedinghigh-throughput phenotypingmaizenormalized difference vegetation indexoptimized soil adjusted vegetation indexsatellitewheat
